Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0310 ATGGGTAAGATTCTCCGAGAAACCGCGAAGCCGTCTGCAAATTCCTCATCGGCGCACCCCTCTGCGGCGGCGCCCGCAACCACGTCGTCGACGTCGATGACAGAGACGGTGAGAGGCTCTCATCAGTTCAAGATCACGGGGTACTCGCTCTCGAAGGGGATCGGGATTGGGAAGTACATGGCCTCCGACGTGTTTTCCGTCGGAGGGTACAATTGGGCGATTTATTTCTACCCCGATGGAAAGAGCGCGGATGACAATGCGACCTACGTGTCGCTCTTCATCGCTCTGGCCAGCGAGGGCACCGACGTTAGGGCACTTTTCGAGCTCACCCTTTTGGATCAGAGTGGCAAGGAGAGGCACAAGGTTCATAGCCATTTCGAGAGGACTCTCGAGAGCGGCCCTTACACCTTAAAATACCGCGGGAGTATGTGGTGGGTTTAA 441 0.5624 MGKILRETAKPSANSSSAHPSAAAPATTSSTSMTETVRGSHQFKITGYSLSKGIGIGKYMASDVFSVGGYNWAIYFYPDGKSADDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWWV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0310 146 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 37 144 IPR008974 GO:0005515
Aed4g0310 146 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 19 142 - -
Aed4g0310 146 MobiDBLite consensus disorder prediction 1 36 - -
Aed4g0310 146 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 19 142 IPR045005 GO:0016567
Aed4g0310 146 SUPERFAMILY TRAF domain-like 35 129 - -
Aed4g0310 146 CDD MATH 39 135 IPR002083 GO:0005515
Aed4g0310 146 ProSiteProfiles MATH/TRAF domain profile. 38 146 IPR002083 GO:0005515
Aed4g0310 146 MobiDBLite consensus disorder prediction 9 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0310 Aed-Chr4 2260500 2264462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0310 K10523 - gmx:102668882 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0310 4 2260500 2264462 Aed4g0310 4 2260500 2264462 ECH
Aed4g0310 4 2260500 2264462 Aed8g0790 8 6735537 6739488 PCT