Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0786 ATGGCGGCTGGCCCCACATCACCCTCCGATCGACCACCAACCATGGTCGCTCCACCAATGCTCGTCTCGGACTCATTCGCCAAGGACGCCATCCTCGCCTGGTTCCGCGGCGAGTTCGCCGCCGCCAACGCCATCATCGACGCCCTCTGCGCGCATCTCTCCGCCTCCGCACATGACTACGACGCCCTCTTCGCTGCCATCCACCGCCGCAGGCTCAACTGGATCCCCGTCCTCCAGATGCAGAAGTACCACTCCATCGCCGATGTCAACCTCGAGCTCCAACGACTCGCCGTCGCCGACGACGCCGGACCTAAATCCGACGACAAAACCACCTCGTCGGAGACCGTCGGAAATGGTCCTGCCGCCACCGGTGATGAACATGAGGAGTATGAATCCCCCGAGAGCGAGATTACTGATTCAGGGTCTCAAGAAATGCAGGCTAGTCCCATGGTCATGAACATCAATATATGTTCCAATCATGAAGAGTGCGAAGGGCGTTCTTCACGGTTTAAGTTGACAAAAGGTTTCACAGCAAAAGAATCGGTGAAGGGACATATGGCAAGTGAAACTTTTATATTATTCAACAAGCAGATGAAAGCCAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCAATATTTGGTCAGATAAAGGAGGACGCAAAAAGCAATATAGAGCCAATTCCAACACTTCTCCAAGGTGTCATTGATCACCTTATTCAGTGGCAATTACTTCCCGAGTACAAAAGACCAAATGGTTGCATCATCAACTATTTTGAAGAGGAGGAGTTTTCTCAGCCATTCCTGAAACCACCGCATCTGGATCAGCCTGTGTCCACTCTTCTTCTCTCTGAATCAAGTATGGGTTTTGGGCGTATACTTACGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAATCAATGCCAATCACCAACTCCTACAACCATGACTGTGTGGCAACCTGGCATTGCTGCAGCAGCAAGTCCATATGCTTTGCCAAATGGTGGTGGTGTTCTAACTAGCTATGAGGGTACTATGGACATGATGATGCCTAAATGGGGAATGCTTGGTGGCCCAATGGTGATGCTAACCCCTATGCATCCTGTGCCGCTGAGCCCTCGCAAACTTGGTGGTGGCGGTGGTGGTGGCGGCACTGGAGTGTTTTTGCCTTGGAATGTGCCATCTAGAAAACCTGCTAAGCATCTTCCCCCACGTGCACAAAAAGGAAGGCTGCTCACATTGCCTTCCCCTGTTGTTGTTGAACCACAAATGGTGGGAGAGTCCACTTCTGAACCAAGCATTTGTGTTGTTGAAGGATAA 1449 0.5114 MAAGPTSPSDRPPTMVAPPMLVSDSFAKDAILAWFRGEFAAANAIIDALCAHLSASAHDYDALFAAIHRRRLNWIPVLQMQKYHSIADVNLELQRLAVADDAGPKSDDKTTSSETVGNGPAATGDEHEEYESPESEITDSGSQEMQASPMVMNINICSNHEECEGRSSRFKLTKGFTAKESVKGHMASETFILFNKQMKANKRELIQLGVPIFGQIKEDAKSNIEPIPTLLQGVIDHLIQWQLLPEYKRPNGCIINYFEEEEFSQPFLKPPHLDQPVSTLLLSESSMGFGRILTSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQSPTPTTMTVWQPGIAAAASPYALPNGGGVLTSYEGTMDMMMPKWGMLGGPMVMLTPMHPVPLSPRKLGGGGGGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLTLPSPVVVEPQMVGESTSEPSICVVEG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0786 482 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 249 346 IPR005123 -
Aed8g0786 482 Gene3D - 150 353 IPR037151 -
Aed8g0786 482 SUPERFAMILY Clavaminate synthase-like 225 345 - -
Aed8g0786 482 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 4 187 - -
Aed8g0786 482 Pfam 2OG-Fe(II) oxygenase superfamily 253 343 IPR044861 -
Aed8g0786 482 MobiDBLite consensus disorder prediction 101 144 - -
Aed8g0786 482 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 187 479 IPR044842 GO:0003729|GO:0006402|GO:0032451
Aed8g0786 482 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 4 187 IPR044842 GO:0003729|GO:0006402|GO:0032451
Aed8g0786 482 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 187 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0786 Aed-Chr8 6698719 6705470 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0786 K10767 - gmx:100791586 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0786 8 6698719 6705470 Aed8g0786 8 6698719 6705470 ECH
Aed4g0317 4 2296420 2304296 Aed8g0786 8 6698719 6705470 PCT