Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0317 ATGGCGGCTGTCCCAGCATCGCGGACCGATCCACCGGCAATGGTGCCGCCGCCGATGCTCGTCTCCGACTTCTACGCCAAGGATGCCATTCTCGCCTGGTTCCGCGGCGAGTTCGCCGCGGCCAACGCCATCATCGACGCCCTCTGCGGCCACCTCGCCAACGCCGCCGACTCCTCCGACTACGATGCCGTCTTCTCCGCCATCCACCGCCGTCGCCTCAACTGGATCCCCGTCATCCAGATGCAGAAGTATCACTCCATCGCCGACGTCGCTCTCGAGCTCCGCAGAGTCGCCGAGAAGAAAACAGAACGCCAAGCCGCGAAGAAAAGCGATAGCAGCTTCGATGAGGAAGGGAAATTGGAGAAGGAGACCGTGGAAAATGGCGGGAACGCCGGTGACGCCGAAGCCGCGCCGGAGTATGATTCGCCGGACAGTGAAATAACAGATTCAGGATCTCAAGAAATGCAACCCAGTGTGATGAACAGCAATATATGTTCCAATCATGAAGAATGTGAAGGACGTTCTTCACAGATAAAGCTGACAAAAGGATTCACAGCAAAGGAGTCCGTGAAGGGGCATATGGCAAGTTCTTTCGTGAATGTTGTGAAAGGATTAAAGTTGTATGAGGATGTTTTTTCCGAATCAGAAATCTGCAAGCTTACTGATTTTGTGAATGAGATTCATGCTGCTGGCCAGAACGGGGAGCTCTCAGGTGAAACTTTTATACTATTCAACAAACAGATGAAGGCAAACAAGAGAGAGCTGATTCAATTGGGTGTTCCGATATTTGGACAGATAAAGGACGATACCAAAAGCAATATAGAGCCGATTCCAGCACTTCTCCATGATGTCATTGATCACCTTATTCAATGGAAATTAATTCCAGAGTACAAGAGGCCAAATGGTTGCATCATCAACTTTTTTGAGGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCGCATTTGGACCAACCTCTATCCACCCTTCTTCTCTCTGAATCAACAATGGCTTTTGGCCGTATCCTAACGAGTGAAAGTGATGGGAACTACAAGGGGCAACTCATGCTCTCATTGAAGGAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTTCTGACACGGCAAGGCATGTAATGTGTCCATCCCCTAACAGAAGGGTGAGCATCACCTTCTTTAGAGTGAGACCAGACTCCAATCAATGTCAGTCAGCAACTACAACTACTACCATGACAAGTGCGATGACTCTTTGGCAACCTGGCATTGCTAGCCCATATACCATGCCAAATGGAGCTCTAAGTGGCTATGAGGCAATGGATATGAGGCCACCCAATTGGGGAATAGTTAGTGCTCCAATGGTCATGCTAGCCCCTATGCGCCCTATCCCAGTGAACCCTCGCAAACTTCCTCGAGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGTGCATCCAGAAAACACGCAAGGCATCTTCCACCGCGTGCTCAAAAGGGACGTCTTATGGAATTACCCTCTCCAGTTGAATCACACATTGACATGGGAGAGTCCACTTCTGAACCCAGCATTGCTGTTGTTGAAGGATAG 1581 0.5003 MAAVPASRTDPPAMVPPPMLVSDFYAKDAILAWFRGEFAAANAIIDALCGHLANAADSSDYDAVFSAIHRRRLNWIPVIQMQKYHSIADVALELRRVAEKKTERQAAKKSDSSFDEEGKLEKETVENGGNAGDAEAAPEYDSPDSEITDSGSQEMQPSVMNSNICSNHEECEGRSSQIKLTKGFTAKESVKGHMASSFVNVVKGLKLYEDVFSESEICKLTDFVNEIHAAGQNGELSGETFILFNKQMKANKRELIQLGVPIFGQIKDDTKSNIEPIPALLHDVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPLSTLLLSESTMAFGRILTSESDGNYKGQLMLSLKEGSLLVMRGNSSDTARHVMCPSPNRRVSITFFRVRPDSNQCQSATTTTTMTSAMTLWQPGIASPYTMPNGALSGYEAMDMRPPNWGIVSAPMVMLAPMRPIPVNPRKLPRGGTGVFLPWKGASRKHARHLPPRAQKGRLMELPSPVESHIDMGESTSEPSIAVVEG 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0317 526 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 299 396 IPR005123 -
Aed4g0317 526 SUPERFAMILY Clavaminate synthase-like 198 395 - -
Aed4g0317 526 MobiDBLite consensus disorder prediction 145 159 - -
Aed4g0317 526 MobiDBLite consensus disorder prediction 101 128 - -
Aed4g0317 526 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 3 524 IPR044842 GO:0003729|GO:0006402|GO:0032451
Aed4g0317 526 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 3 524 - -
Aed4g0317 526 MobiDBLite consensus disorder prediction 101 159 - -
Aed4g0317 526 Gene3D - 187 403 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0317 Aed-Chr4 2296420 2304296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0317 K10767 - gmx:100796344 899.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0317 4 2296420 2304296 Aed4g0317 4 2296420 2304296 ECH
Aed4g0317 4 2296420 2304296 Aed8g0786 8 6698719 6705470 PCT