Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0778 ATGATCTCCACAAGGCAAGACCCTTTTTTGCCCCACACCCACTTCTCCACCATGCTCAAGCTCCTCAACAAGAGCCTTCGCCGCCTCCTCCGCCGTCTCCGGTGGCCAATACGCCGCCGCTCAAAGCCCAAAGTAGTAGTAATCAACAAGCTCGGAAAAAACGCCCCAAAAGCCCAAACCGAACCAAGCACGAATTTTTCATCAACGGTTCATCCCAACGCGCAATTGGGTACTCCGAAACCCATTCGAGTGGCGACCTTCAACGCCGCCCTGTTCTCCATGGCGCCGGCGCTCCCAAAACCCACATTCGAGGACCAAAACGGCGTCGCTTCAGGAAACCCGAATCCGCGATCGAAGGAGCGTCCCAGAAGCATACTGAAACAATCACAATCACAATCGCAGTCATCAGTGAACAGAGTAAACGACAGAGACAACAACGTGGGGGTGGCGAAATCGAAAATGAGGGTTTCCATAAACTTACCAGACAACGAGATATCGCTGCTGCGAAGCCGACAATCGAGCTTCTCAGAACACGACAAAGCCTCATCGTGGGGGAGTGGTGGTGGGGTCCACGTGGCGAGTAACAGAACAGTTGTTGAGGTTCTGAAAGAAGTGGACGCTGATGTTTTGGGTCTGCAAGATGTGAAGGCCGAGGAAGAGAACGGGATGAAGCCTTTGTCGGATTTGGCGGCGGCGCTGGGAATGTACTATGTTTTCGCCGAAAGCTGGGCACCTGAGTACGGCAACGCTGTCTTGTCCAAATGGCCCATCAAACGCTGGAACTCTCACAAAATCTTTGATCACACTGATTTCAGGAATGTTCTGAAGGCCACAATCGATGTACCACAAGCAGGAGAACTGAACTTCTACTGTACCCACCTAGATCATCTTGATGAGAATTGGCGAATGAAGCAGATAAATGCAATAATCCAATCTAGTGATGAGCCTCACATCTTAGCTGGAGGACTTAATTCACTTCATGAATCGGATTACTCTCAAGAAAGATGGACAGATATTGTGAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGTAAAGACTACACAGATGCTAAGGACTATGCAGGGGAGTGCGAGTCAGTTGTCATGATTGCCAAGGGCCAAAGTGTGCAAGGAACATGTAAGTATGGAACTCGGGTAGATTACATATTATCATCATCAAATTCTCCATACAAGTTTGTTCCCGGTTCCTATTTAGTCCTTTCTTCCAAAGGGACATCAGATCATCACATAGTGAAAGTTGATGTGGTGAAGGCAGATAACAATCCAGAAGAAACTAATGTGACAAAGAATCCGCAGCAACCAAGACAGAGAGTTATAAAGATAACAGAATCCACTCCCTCTAAAGGCATCTGGAAAACACACACTTAA 1419 0.4771 MISTRQDPFLPHTHFSTMLKLLNKSLRRLLRRLRWPIRRRSKPKVVVINKLGKNAPKAQTEPSTNFSSTVHPNAQLGTPKPIRVATFNAALFSMAPALPKPTFEDQNGVASGNPNPRSKERPRSILKQSQSQSQSSVNRVNDRDNNVGVAKSKMRVSINLPDNEISLLRSRQSSFSEHDKASSWGSGGGVHVASNRTVVEVLKEVDADVLGLQDVKAEEENGMKPLSDLAAALGMYYVFAESWAPEYGNAVLSKWPIKRWNSHKIFDHTDFRNVLKATIDVPQAGELNFYCTHLDHLDENWRMKQINAIIQSSDEPHILAGGLNSLHESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKADNNPEETNVTKNPQQPRQRVIKITESTPSKGIWKTHT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0778 472 MobiDBLite consensus disorder prediction 125 145 - -
Aed8g0778 472 Pfam Endonuclease/Exonuclease/phosphatase family 194 425 IPR005135 GO:0003824
Aed8g0778 472 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 193 471 - -
Aed8g0778 472 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 18 183 - -
Aed8g0778 472 SUPERFAMILY DNase I-like 192 432 IPR036691 -
Aed8g0778 472 MobiDBLite consensus disorder prediction 100 152 - -
Aed8g0778 472 Gene3D Endonuclease/exonuclease/phosphatase 183 435 IPR036691 -
Aed8g0778 472 MobiDBLite consensus disorder prediction 52 77 - -
Aed8g0778 472 MobiDBLite consensus disorder prediction 56 75 - -
Aed8g0778 472 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 193 471 - -
Aed8g0778 472 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 18 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0778 Aed-Chr8 6635752 6640507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0778 - - gmx:100801298 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0778 8 6635752 6640507 Aed8g0778 8 6635752 6640507 ECH
Aed4g0321 4 2315798 2318961 Aed8g0778 8 6635752 6640507 PCT