Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0321 ATGCTTAAACTCCTGAACAAGAACCTCCGTCGCCTGAGCTCTCACCTCCGCTGGCCCCCTCGGCGTCGTTCGAAGCCAAAGCTAAGCTTCACCAACCCCACTCCTCCTCAACCAATACGAATCGCAACGTTCAACGCCGCATTCTTCTCCATGGCACCGGTGCTTCCCGAACCCGATGAAGATGAAGACAAAAGCGCCGCCACCTCAGATGACAACGTGGGACGAGCGAAGCCACGGAGCATTCTAAAACAGTCGCAGCAGCAGTCGTCTCCGCTGCTGCTGCAGGAGGGGAATAAGTCAAAGTCAAAGATGAGAGTGTCCATCAACTTACCCGACAACGAGATTTCGCTGCGCCAAACGAGCTTCTCCGAACACGACAGATCATCAAAAGGCTCCTTGTCATGGTCGTGGAGTTTCGCCGAGGGAAGAATCGAACAAGAGAGACAACAAAAAAGAACGGTTGTTGAAGTTCTGAAAGAGCTAAACGCCGACGTTTTGGGGTTGCAAGACGTGAAGGCGGAGGAAGAGAACGGGATGAAGCCTTTGTCGGATTTGGCTGAAGCTCTTGGGATGAACTACGTCTTCGCTGAAAGCTGGGCTCCTCAATACGGCAACGCCGTTTTGTCTAAGTGGCCCATTAAACGCTGGAAGCTACAGAAAATCTTTGATCACAACGATTACAGGAATGTTCTGAAGGCCACGATCGATGTACCTCAAGAAGGTGAACTCCACTTTTACTGCACCCACCTTGATCATCTTGATGAGAATTGGAGAATGAAGCAAATAAATGCAATTATTCAATCAAATGATGAGCCGCACATTTTAGCTGGAGGCCTTAATTCGCTCGATGAATCAGATTATTCTCAAGAAAGATGGACAGATATTGTAAAGTACTATGAAGAGATGGGAAAGCCAACACCGAAGGTTGAAGTGATGGAACATCTAAAGAGCAGACACTACACGGATGCTAAGGACTTTTCAGGGGAATGTGAGTCCGTTGTCATGATTGCCAAAGGACAAAGTGTACAAGGGACATGTAAGTATGGAACTAGGGTTGATTATATATTATCTTCCTCAGATTCACCATATAAATTCGTATCTGGATCCTACTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTGAAAGTAAATAGTAATAATCCTCAAGAAAATCATCTGACAAAGAAGCAGCAGGGACAAGCAAGACAGAAAGTTGTAAGAATAAAATCAAGGCCATCCAAATGTATATGA 1275 0.4596 MLKLLNKNLRRLSSHLRWPPRRRSKPKLSFTNPTPPQPIRIATFNAAFFSMAPVLPEPDEDEDKSAATSDDNVGRAKPRSILKQSQQQSSPLLLQEGNKSKSKMRVSINLPDNEISLRQTSFSEHDRSSKGSLSWSWSFAEGRIEQERQQKRTVVEVLKELNADVLGLQDVKAEEENGMKPLSDLAEALGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHNDYRNVLKATIDVPQEGELHFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMEHLKSRHYTDAKDFSGECESVVMIAKGQSVQGTCKYGTRVDYILSSSDSPYKFVSGSYLVLSSKGTSDHHIVKVDVVKVNSNNPQENHLTKKQQGQARQKVVRIKSRPSKCI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0321 424 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 32 421 - -
Aed4g0321 424 MobiDBLite consensus disorder prediction 13 37 - -
Aed4g0321 424 MobiDBLite consensus disorder prediction 55 105 - -
Aed4g0321 424 Coils Coil 144 164 - -
Aed4g0321 424 Pfam Endonuclease/Exonuclease/phosphatase family 144 381 IPR005135 GO:0003824
Aed4g0321 424 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 32 421 - -
Aed4g0321 424 MobiDBLite consensus disorder prediction 79 105 - -
Aed4g0321 424 Gene3D Endonuclease/exonuclease/phosphatase 133 390 IPR036691 -
Aed4g0321 424 SUPERFAMILY DNase I-like 38 388 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0321 Aed-Chr4 2315798 2318961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0321 - - gmx:100820515 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0321 4 2315798 2318961 Aed4g0321 4 2315798 2318961 ECH
Aed4g0321 4 2315798 2318961 Aed8g0778 8 6635752 6640507 PCT