Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0764 ATGACCGGAGTGGTCATGGTTACCAAGGGCGGTGGATGCGGCGGTGGCAAGCGGACGAGGGTGGCGCGAACCGCCGAGGAGGATGAAGAAGAGCAGCAGAACCAGCTCTCGCTCGTGGCGCTTCTCTTGGCGGCCATAAGAAAGTCGATGGTGTCGTGCAGAGTGGACCCACCCGACGATGTAATCTCCACCGTCCATCACATGGAGATGGAGATCGGATGGCCCACCAACGTCCAGCACATCACTCATGTCACCTTCGACCGCTTCAACGGCTTCCTCGGTCTCCCCTATGAATTCGAAGTCGAGATCCCTGCCAAGGTTCCCAGTGCTAGTGTAAGTGTGTTCGGCGTCTCAGCAGAATCTATGCAGTGTTCGTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTCTTGCTAATGCAGGACCGTCTATACTCACAGGGAGGCTTAAAGGCTGAGGGTATATTTCGCATAAACCCCGAAAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCATTGTGCCGGATGACATTGATGTTCACTGTTTGGCAGGACTGATTAAAGCGTGGTTCCGAGAGCTACCTTCGGGAGTGCTAGATGGACTTTCTCCTGAGCAAGTACTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAGCCAACTGAGTCTGCCTTGCTCAGCTGGGCTATTGATCTCATGGCTGATGTTGTAGAAGATGAGGAATTTAACAAAATGAATGCAAGGAATATTGCAATGGTTTTTGCTCCTAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCAGTTCAAGTGATGAACTTACTCAAGACACTTATCATGAAGACACACAGAGAACGCGAAGAAACAGCAACAACAGGTGGCTATTCTCCTGTGTCATATCATTCATCAGATCGCCAGTCTGAGGATGAATATGACAGTCAGCAAGAAATGGACACAAGCGGTGAATTGAGAGGAACCAAATCAGATTATGATGATCATGTTCACTGTGGCCACAGCAGTGAAGGGGAGGTTGAATCTTTGAGCGAGATAGAGGAGCGTTTCTTGAAGCAGTTGGACGAGAACAAAAAAGGATTCTCAGAAGAACCTGCAGGTCATTTGGATAAGTATGTTAGCACCAGAAGTTTCTCTGGCTGTAGCATGGAACCTTCTATATCCATTTCTGATGGCAAAGCAGGAGATTCCTGCTTGAGGAATACACTGATGACTGGTTTGGCCTCAAATGTTGACTCAAGTAGTTCATCAATAGGATGTAGAAGCACCAAAGATGCAGAGATGATGGATAAATTTGAGGATTCTATTTCACCTGTCCCACCACTCTTTGCTTCTAGTTAA 1386 0.4762 MTGVVMVTKGGGCGGGKRTRVARTAEEDEEEQQNQLSLVALLLAAIRKSMVSCRVDPPDDVISTVHHMEMEIGWPTNVQHITHVTFDRFNGFLGLPYEFEVEIPAKVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEDEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTHREREETATTGGYSPVSYHSSDRQSEDEYDSQQEMDTSGELRGTKSDYDDHVHCGHSSEGEVESLSEIEERFLKQLDENKKGFSEEPAGHLDKYVSTRSFSGCSMEPSISISDGKAGDSCLRNTLMTGLASNVDSSSSSIGCRSTKDAEMMDKFEDSISPVPPLFASS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0764 461 MobiDBLite consensus disorder prediction 296 358 - -
Aed8g0764 461 Pfam P21-Rho-binding domain 71 101 IPR000095 -
Aed8g0764 461 Pfam RhoGAP domain 134 268 IPR000198 GO:0007165
Aed8g0764 461 SMART RhoGAP_3 131 294 IPR000198 GO:0007165
Aed8g0764 461 ProSiteProfiles CRIB domain profile. 72 85 IPR000095 -
Aed8g0764 461 PANTHER MKIAA1688 PROTEIN 1 425 IPR044785 GO:0005096
Aed8g0764 461 MobiDBLite consensus disorder prediction 333 358 - -
Aed8g0764 461 SMART PBD_5 72 106 IPR000095 -
Aed8g0764 461 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 425 - -
Aed8g0764 461 ProSiteProfiles Rho GTPase-activating proteins domain profile. 117 298 IPR000198 GO:0007165
Aed8g0764 461 SUPERFAMILY GTPase activation domain, GAP 113 291 IPR008936 GO:0007165
Aed8g0764 461 Gene3D Rho GTPase activation protein 103 297 IPR008936 GO:0007165
Aed8g0764 461 Gene3D CRIB domain 67 102 IPR036936 -
Aed8g0764 461 CDD RhoGAP 134 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0764 Aed-Chr8 6534004 6537057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0764 - - gmx:100801481 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0764 8 6534004 6537057 Aed8g0764 8 6534004 6537057 ECH
Aed2g2155 2 25532691 25537238 Aed8g0764 8 6534004 6537057 PCT