LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed2g2155	ATGACAGGCCAAGTGGTGGTGACCAACGGTGGCGGATGCGGTTCCGTCGGGAAGGGCCGCAGAGGCGGCGAGGAGGACCAGAACCCGGCGTCGCCCGTGGCGATTTTTCTGGCGGCGCTGAGGAAGTCAATGGTGGCGTGCAGTGTCGACAGTCCCGACGATGTAATCTCCGCCGTCCATCATCCCATGGAGATCGGATGGCCCACAAACGTTAAGCATGTTAGCCATGTCACCTTCGATCGCTTCAATGGCTTTCTGGGTCTTCCTCTCGAGTTAGAGGTTCATGTCCCCGCTCCGGTTCCCAGTGCTAGGTATGTTAGTGTGTTTGGTGTCTCAGCAGAATCAATGCAGTGTTCCTATGATTCAAAAGGAAACAGTGTCCCCACTATTCTACTGCTAATGCAAGAGCGATTATACTCACAGGGTGGCCTGAAGGCTGAAGGCATATTCCGCATAAATCCAGAAAACAGTCAAGAGGAGCATTTGAGGGAGCAATTGAATAAGGGCATTGTGCCAGATGACATTGATGTCCACTGTTTGGCAGGCTTAATCAAAGCATGGTTCAGAGAACTTCCTTCAGGAGTGCTAGATGGACTTTCCCCCGAGCAAGTTCTTGAGTGCAACACAGAAGAAGAATCTGTTCAGCTTGTGAAGCAGATAAAGCCAACTGAGTCAGCCTTACTCAACTGGGCTATTGATCTCATGGCTGATGTTGTAGCCGAAGAGGATTATAACAAAATGGATTCAAGAAACATCGCTATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCACTAACTGCTCTGATGCATGCGGTCCAAGTTATGAATTTACTGAAGAACCTAATACTGAGGACACTTAGAGATCGTGAAGAAACAGCTGCAGCAGGATATTCACCCATGTCATCTCTTTCATCTGATCACCAATCTGAGGATGACTATGATAGTCAGCAAGAAATGGATATTGGTGATGAATTGAGAGAGACCAATTCAGATGATGATGATGACGACGACGACGATAATGATGTTAACTACAGTCATGCCAGTGAAGAGGAGGAAGGGGAGGCAGATGCATCAGTAAGTGAGATAGTGGAATGCTTCTTGAAGCGTTTGGATGAGAAAACAAAAAGATTCACAGAAGAATCTGCAGGGTATTTGCAAGAGAAGTTAGAGGAGAGCCCCAAGAGTTGCTCTGGCTATAACTTGGAATCTGCTTTAACATTTACTGATATCAAAACTGTGGATTCGTGCTCTAGTCCCTCTTATGAAGATGACTCAAGAACAACTCTGACTGCTGAGGAGGAATCAAATGCTGACACAAGTAGTCCATCAATAGATAGTACAAGCACCAATGATGTGGAGATGATTGATAAATTTACAGATTGTGTTTCACTAGTTCCACTGTTTGCATCTAGTTAA	1422	0.4592	MTGQVVVTNGGGCGSVGKGRRGGEEDQNPASPVAIFLAALRKSMVACSVDSPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPAPVPSARYVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENSQEEHLREQLNKGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVQLVKQIKPTESALLNWAIDLMADVVAEEDYNKMDSRNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKNLILRTLRDREETAAAGYSPMSSLSSDHQSEDDYDSQQEMDIGDELRETNSDDDDDDDDDNDVNYSHASEEEEGEADASVSEIVECFLKRLDEKTKRFTEESAGYLQEKLEESPKSCSGYNLESALTFTDIKTVDSCSSPSYEDDSRTTLTAEEESNADTSSPSIDSTSTNDVEMIDKFTDCVSLVPLFASS	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed2g2155	473	SUPERFAMILY	GTPase activation domain, GAP	107	285	IPR008936	GO:0007165
	Aed2g2155	473	Pfam	P21-Rho-binding domain	64	92	IPR000095	-
	Aed2g2155	473	CDD	CRIB	63	93	-	-
	Aed2g2155	473	Gene3D	Rho GTPase activation protein	97	292	IPR008936	GO:0007165
	Aed2g2155	473	SMART	RhoGAP_3	125	288	IPR000198	GO:0007165
	Aed2g2155	473	MobiDBLite	consensus disorder prediction	1	28	-	-
	Aed2g2155	473	MobiDBLite	consensus disorder prediction	295	361	-	-
	Aed2g2155	473	CDD	RhoGAP	128	284	-	-
	Aed2g2155	473	PANTHER	RHO GTPASE ACTIVATION PROTEIN-RELATED	1	473	-	-
	Aed2g2155	473	MobiDBLite	consensus disorder prediction	416	451	-	-
	Aed2g2155	473	Gene3D	CRIB domain	60	96	IPR036936	-
	Aed2g2155	473	SMART	PBD_5	65	99	IPR000095	-
	Aed2g2155	473	MobiDBLite	consensus disorder prediction	309	326	-	-
	Aed2g2155	473	MobiDBLite	consensus disorder prediction	434	451	-	-
	Aed2g2155	473	ProSiteProfiles	CRIB domain profile.	65	78	IPR000095	-
	Aed2g2155	473	PANTHER	MKIAA1688 PROTEIN	1	473	IPR044785	GO:0005096
	Aed2g2155	473	MobiDBLite	consensus disorder prediction	327	347	-	-
	Aed2g2155	473	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	111	292	IPR000198	GO:0007165
	Aed2g2155	473	Pfam	RhoGAP domain	128	262	IPR000198	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed2g2155	Aed-Chr2	25532691	25537238	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed2g2155	-		K20642	gmx:100812700	816.609

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed2g2155	2	25532691	25537238	Aed8g0764	8	6534004	6537057	PCT