Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0753 ATGAAGCCATGCAACGGGAATCATGAGATTCCCTTCCACACCCATTACGGTAGGCATGATAACACCTCATCAAACCACGCACCGTCTCGCGAGAAACTCGATCTTCTCGTCTCGTCTCGTCCCAACACAACGGATAAGACCATCATGCAACGCCGCCCATCCAACGACTCCAACTCACCCACATCTAAGCACTGCTGCGTTACACAACGCAACTACCGTGTTGTTGTTATTGTTCATTCGGAAAACGACAGTGTTTTGGTTAGGATTTCTATTCCATTGGACATGCGGCCGAGAGTAGCGTACTCGTTCCCCGAGGAGGTGCTGGAGCACGTGTTCTCCTTCATCGAGTGCGACGTGGACCGCGGCTCGATCTCCCTCGTCTGCAAGTCATGGTACGAGATCGAGCGCTGGTGTCGCCGGAGAGTCTTCATCGGAAACTGCTACGCCGTATCTCCGGCCACCGTGGTGAATCGCTTCCCGAAAGTGAGATCCGTCGCCATCAAGGGGAAGCCACACTTCGCGGACTTCAATTTGGTTCCCGAGGGCTGGGGCGCTTACGTGGGCCCCTGGATCAAGGCCATGGCCGCTGCCTACCCTTGGCTTCAGGAGATCAGGCTCAAGAGGATGGTCGTCTCCGACGAATGCTTGGAACTCATCGCCAAATCGTTTAAGAACTTCCAGGTCTTGGTCCTCACCTCTTGCGAGGGTTTCACTACTGATGGACTGGCTGCCATTGCCGCCAATTGCAGATACCTTGCCATTGTTATAACTTTGGCTCAGCGTGGTTTGGTTTACTGCATTCTCTATTTTGATTATGAGACTGAAGAATTTTTAGTTTCTGAACATGTTGATAAATCCGTTGTGGTAATGAATTGTAGGAATTTGAGGGAGTTGGAGTTGCGGGAGAGTGAGGTGGAAGACATTTGTGGGCATTGGCTGAGCCATTTTCCTGATTCGTACACATCCTTGGTTTCCCTTAACATTTCTTGCTTAGGCAATGAGGTGAATTTGTCTGCCCTAGAGCGCCTGGTTGGTAGGTGTCCCAATCTGCAGACTCTTCGCCTCAACCGTGCCGTACCGCTAGACAGGCTAGCCAACCTTCTCCGAGGAGCTCCTCAGTTGGTTGAGTTGGGCACCGGAGCCTACACGAGCGAGCTGCGACCCGAGGTCTTCACAAACCTCGCGGAAGCATTTTCTGGGTGCAAGCAATTGAAGGGCTTGTCTGGCTTTTGGGACGTGCTCCCCTCCTACCTTCCAGCTGTCTATCCTATCTGCTCCAACCTGACATCACTGAACTTGAGTTATGCAACTATTCAAAGCCCGGATCTTATCAAGCTCGTTGGTCAATGTGAGAGTTTGCAGCGTTTATGGGTGCTGGATTACATTGAAGATGCTGGGCTTGAGGTGATTGCTGCATCGTGCAAGGATCTGAGGGAGTTGAGAGTGTTTCCCTCTGACCCGTTTGGGTTAGATCCAAATGTAGCATTGACTGAGCAGGGCCTCGTTTCTGTGTCTGAAGGCTGCACCAAGCTCCAGTCAGTTCTATATTTTTGTCGTCAAATGTCTAATGCTGCCTTAGATACAATTGCCAGGAATAGGCCTAATTTGACTCGTTTTAGACTGTGTATTATCGAGCCTCGAGCTCCTGACTATCTTACCCATCAACCTCTGGATGCTGGTTTTGGAGCTATTGTAGAGCATTGCAAGGATCTTCGGCGCCTTTCCCTTTCCGGGCTTCTTACTGACCGTGTTTTTGAGTATATTGGTACTTATGGTAAGAAGCTTGAGATGCTTTCTGTGGCTTTTGCCGGAGATAGTGATTTGGGACTCCATCATGTGCTGTCTGGGTGTGACAACCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAAGCGCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCACTTGCTCAGTGAGTTATGGAGCATGTAAACTGCTGGGTCAGAAACTGCCAAGACTTAGTGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCGGAGAGTAGTCCTGTTGAGAAGCTATACATATACAGGACTGTTTCTGGGCCAAGATCGGACATGCCAGGCTATGTATGGAGAATGGATGATGATTCTGCATTAAGGATTTCTTGA 2169 0.5002 MKPCNGNHEIPFHTHYGRHDNTSSNHAPSREKLDLLVSSRPNTTDKTIMQRRPSNDSNSPTSKHCCVTQRNYRVVVIVHSENDSVLVRISIPLDMRPRVAYSFPEEVLEHVFSFIECDVDRGSISLVCKSWYEIERWCRRRVFIGNCYAVSPATVVNRFPKVRSVAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVVSDECLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRYLAIVITLAQRGLVYCILYFDYETEEFLVSEHVDKSVVVMNCRNLRELELRESEVEDICGHWLSHFPDSYTSLVSLNISCLGNEVNLSALERLVGRCPNLQTLRLNRAVPLDRLANLLRGAPQLVELGTGAYTSELRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYATIQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLDPNVALTEQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARNRPNLTRFRLCIIEPRAPDYLTHQPLDAGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSTCSVSYGACKLLGQKLPRLSVEVIDERGPPDSRPESSPVEKLYIYRTVSGPRSDMPGYVWRMDDDSALRIS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0753 722 Pfam F-box 101 141 IPR041567 -
Aed8g0753 722 Gene3D Ribonuclease Inhibitor 140 713 IPR032675 -
Aed8g0753 722 Pfam Transport inhibitor response 1 protein domain 160 206 IPR041101 -
Aed8g0753 722 SMART LRR_CC_2 568 591 IPR006553 -
Aed8g0753 722 SMART LRR_CC_2 508 532 IPR006553 -
Aed8g0753 722 SMART LRR_CC_2 223 248 IPR006553 -
Aed8g0753 722 SMART LRR_CC_2 617 641 IPR006553 -
Aed8g0753 722 MobiDBLite consensus disorder prediction 12 27 - -
Aed8g0753 722 Gene3D - 95 139 - -
Aed8g0753 722 MobiDBLite consensus disorder prediction 1 63 - -
Aed8g0753 722 MobiDBLite consensus disorder prediction 36 63 - -
Aed8g0753 722 SMART fbox_2 103 144 IPR001810 GO:0005515
Aed8g0753 722 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 288 713 - -
Aed8g0753 722 SUPERFAMILY RNI-like 129 671 - -
Aed8g0753 722 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 100 258 - -
Aed8g0753 722 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 100 258 - -
Aed8g0753 722 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 288 713 - -
Aed8g0753 722 SUPERFAMILY F-box domain 102 135 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0753 Aed-Chr8 6456498 6460961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0753 K14485 - gmx:100809794 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0753 8 6456498 6460961 Aed8g0753 8 6456498 6460961 ECH
Aed2g2167 2 25601941 25605929 Aed8g0753 8 6456498 6460961 PCT