Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2167 ATGCAGAGAATGGCGTACACGTTTTCCTTTCCGGAGGAGGTGCTGGAGCACGTGTTCTCGTTCATTCCGAGCGAGAGGGACCGGAACGCGATCTCGCTGGTGTGCAAGTCGTGGTACGAGATCGAGAGGTGGTGCAGGAGGAAGGTGTTCGTCGGGAACTGCTACGCGGTGAGCCCCGTGATGGTGATCAAGCGGTTCCCGGAGGTGAGATCCATTGAGCTGAAAGGGAAGCCGCACTTCGCAGACTTCAATTTGGTTCCTGACGGCTGGGGCGGCTACGCTTGCCCCTGGATCGCCGCCATGGCACGCGCCTTCCCCTGCCTCGAAGAGATCAGGCTCAAGAGGATGGTCATCACCGACGAGAGCTTGGAACTCATCGCTAAGTCCTTCAAAAACTTCAAGGTCTTAGTTCTCACTTCCTGTGAGGGTTTCACCACTGATGGACTTGCCGCCATTGCTTCCAACTGCAGGAATTTGAGGGAATTGGACTTGCAGGAGAGTGAAGTAGAGGACCTTAGTGGGCACTGGCTAAGCCATTTTCCTGATTCCTACACGTCATTAGTTTCACTTAACATCTCTTGCTTAATCAATGAGGTGAATTTATCTGCACTAGAGCGTCTGCTTGGGAGGTGTCCCAACCTACGGACCCTCCGTCTGAATCGTGCTGTGCCCCTTGATAGACTACCCAACCTACTTCTTCGGTGTCCTCAGCTGGTTGAGTTAGGCACAGGAGTCTACTCAACTGAGATGCGACCAGAGGTCTTCTCAAACCTCGAAGCAGCATTTTCTGCCTGCAAACACTTGAAGACCTTGTCTGGCTTTTGGGATGTGCTCCCTTCCTACCTTCCCGCTGTCTACCCCATCTGCTCCACCCTAACATGGCTTAACTTGAGTTATGCTATTATTCAAAGCTCTGATCTTATTAAGCTCATCAGTCAATGCCCAAATTTGTTGCGATTATGGGTGTTGGATTACATAGAAGATGCTGGTCTTTATGCCCTTGCTGCATCATGTAAGGATCTAAGGGAGTTAAGGGTGTTTCCGTCTGACCCATTTGGTTTAGAACCAAATGTTGCTTTGACAGAACAGGGGCTTGTAACTGTGTCTGAAGGTTGCCCCAAGCTGGAATCAGTTCTATATTTTTGTCGTCAAATGTCTAATGCAGCCCTACACACAATTGCGCGGAACAGGCCTAATATGACTCGTTTCCGGCTTTGTATTATTGAGCCTCGAACTCCTGACTATCTAACCCATGAACCCCTGGATTCTGGTTTTGGAGCTATTGTAGAGCAATGCAAGGATCTTCAACGCCTATCCCTATCTGGTCTTCTTACTGACCGTGTTTTCGAGTATATTGGCACTTATGGGAAGAAGCTGGAGATGCTATCTGTGGCTTTTGCCGGAGATAGTGATCTGGGACTTGATCATGTGCTGTCTGGGTGCGATAATCTTAGGAAGCTGGAGATAAGGGACTGCCCCTTTGGTGACAAGGCCCTTTTGGCAAATGCTGAAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCACCTGCTCAGTGAGTTATGGAGCATGTAAGCTACTGGGTCAGAAAATGCCCAGACTCAACGTTGAAGTCATTGATGAAGGAGGACCTCCAGATTCAAGGCCAGATGATTGCCCTGTTGAGAAGCTTTATATATACAGGACTATTGCCGGGCCAAGGTTGGACATGCCTGGTTTTGTGTGGACTATGGAAGACGATTCTTCACTAAGGTTTGAGTAG 1761 0.494 MQRMAYTFSFPEEVLEHVFSFIPSERDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPVMVIKRFPEVRSIELKGKPHFADFNLVPDGWGGYACPWIAAMARAFPCLEEIRLKRMVITDESLELIAKSFKNFKVLVLTSCEGFTTDGLAAIASNCRNLRELDLQESEVEDLSGHWLSHFPDSYTSLVSLNISCLINEVNLSALERLLGRCPNLRTLRLNRAVPLDRLPNLLLRCPQLVELGTGVYSTEMRPEVFSNLEAAFSACKHLKTLSGFWDVLPSYLPAVYPICSTLTWLNLSYAIIQSSDLIKLISQCPNLLRLWVLDYIEDAGLYALAASCKDLRELRVFPSDPFGLEPNVALTEQGLVTVSEGCPKLESVLYFCRQMSNAALHTIARNRPNMTRFRLCIIEPRTPDYLTHEPLDSGFGAIVEQCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLDHVLSGCDNLRKLEIRDCPFGDKALLANAEKLETMRSLWMSTCSVSYGACKLLGQKMPRLNVEVIDEGGPPDSRPDDCPVEKLYIYRTIAGPRLDMPGFVWTMEDDSSLRFE 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2167 586 SMART fbox_2 10 51 IPR001810 GO:0005515
Aed2g2167 586 Pfam F-box 8 48 IPR041567 -
Aed2g2167 586 Gene3D Ribonuclease Inhibitor 47 577 IPR032675 -
Aed2g2167 586 PANTHER PROTEIN TRANSPORT INHIBITOR RESPONSE 1 8 578 - -
Aed2g2167 586 SMART LRR_CC_2 130 155 IPR006553 -
Aed2g2167 586 SMART LRR_CC_2 481 505 IPR006553 -
Aed2g2167 586 SMART LRR_CC_2 105 129 IPR006553 -
Aed2g2167 586 SMART LRR_CC_2 432 455 IPR006553 -
Aed2g2167 586 SMART LRR_CC_2 372 396 IPR006553 -
Aed2g2167 586 SMART LRR_CC_2 314 337 IPR006553 -
Aed2g2167 586 Pfam Transport inhibitor response 1 protein domain 67 113 IPR041101 -
Aed2g2167 586 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 8 578 - -
Aed2g2167 586 Gene3D - 3 46 - -
Aed2g2167 586 SUPERFAMILY RNI-like 33 535 - -
Aed2g2167 586 SUPERFAMILY F-box domain 3 41 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2167 Aed-Chr2 25601941 25605929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2167 K14485 - gmx:100779021 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2167 2 25601941 25605929 Aed8g0753 8 6456498 6460961 PCT