Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0748 ATGATGGAGCCAATGATGACAAGCATGGTAAGTGAAAAGGCTGTGGTGATATTCAGCAAGAGCACATGTTGCATGAGCCACACCATGAAGTCACTGATACTTAGCTATGGTGCAAGCCCTACTGTTTATGAGATCGATGAAATGACAAATGGAGAGCAGATTGAAAGGGCACTGCTTCAAATGGGGTGCCAGCCAAGTGTACCTGCTGTGTTTGTAGGACAGAGATTCATTGGTGGAACTCAAAGTGTCTTGAGTATGCATCTTCGGAATGAGTTAGCACCACTACTGCTCTAA 294 0.449 MMEPMMTSMVSEKAVVIFSKSTCCMSHTMKSLILSYGASPTVYEIDEMTNGEQIERALLQMGCQPSVPAVFVGQRFIGGTQSVLSMHLRNELAPLLL 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0748 97 Gene3D Glutaredoxin 2 97 - -
Aed8g0748 97 PRINTS Glutaredoxin signature 60 73 IPR014025 -
Aed8g0748 97 PRINTS Glutaredoxin signature 74 87 IPR014025 -
Aed8g0748 97 PRINTS Glutaredoxin signature 15 33 IPR014025 -
Aed8g0748 97 TIGRFAM GlrX-like_plant: glutaredoxin-like family 7 96 IPR011905 -
Aed8g0748 97 SUPERFAMILY Thioredoxin-like 6 96 IPR036249 -
Aed8g0748 97 ProSiteProfiles Glutaredoxin domain profile. 3 97 - -
Aed8g0748 97 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 5 97 - -
Aed8g0748 97 CDD GRX_GRXh_1_2_like 14 95 - -
Aed8g0748 97 PANTHER GLUTAREDOXIN 5 97 IPR011905 -
Aed8g0748 97 Pfam Glutaredoxin 15 77 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0748 Aed-Chr8 6407293 6407586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0748 6 96 Miscellaneous Gene Families AT4G15690 53.846 8.88e-38 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0748 K03676 - gmx:106794875 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0748 8 6407293 6407586 Aed8g0748 8 6407293 6407586 ECH
Aed8g0748 8 6407293 6407586 Aed2g2178 2 25675329 25675637 PCT