Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2178 ATGGATAGAGTTAAGGAGTTGGCATCAAAGAAGGCTGCAGTTATATTTACTAAGAGTTCATGTTGCATGTGTCACAGCATAAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAACGATTCCTATGGGAAGGAAATGGAGTGGGCTTTAAGGGCTATGGGCTGTAACCCTTCAGTCCCAGCAGTGTTCATTGGTGGCAAATTTGTGGGCTCATCCAAAGATGTCATTTCCCTCCATGTTGATGGCTCTCTCAAACAATTGCTCATGGATGCAAGAGCCATCTGGTTTTAG 309 0.4466 MDRVKELASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGKEMEWALRAMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLMDARAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2178 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Aed2g2178 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Aed2g2178 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Aed2g2178 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Aed2g2178 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Aed2g2178 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Aed2g2178 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Aed2g2178 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Aed2g2178 102 CDD GRX_GRXh_1_2_like 12 93 - -
Aed2g2178 102 Pfam Glutaredoxin 14 75 IPR002109 -
Aed2g2178 102 Gene3D Glutaredoxin 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2178 Aed-Chr2 25675329 25675637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2178 1 102 Miscellaneous Gene Families AT4G15700 50.000 2.02e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2178 K03676 - gmx:100819447 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0748 8 6407293 6407586 Aed2g2178 2 25675329 25675637 PCT