Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0668 ATGGATCTCAATATGGATATAAATCATGTTTCAGGTTTGGATTTGGATTGTGGGCCTTTCCTAGGACAACATACGCAGAATGCTGTGAAAAAAGGCCTCATAAGTGAAGCTGATGTGAATGGGGCCTTATTGAACACATTAACAGTCCAAATGAGGTTAGGTATGTATGATGGTGAGCCATCAAGTCATCCATATGGGAACCTTGGTCCAAAAGATGTGTGCACCCCAACTCACCAAGACCTTGCCCTTCAAGCCGCAAGACAAGGGATTGTGCTTCTCAAAAACAAAGGTCCCTCTTTGCCTCTCTCCAAAAAACGTCACCGAAAAGTAGCTGTTATTGGGCCCAACTCTAATGTCACTGTCACAATGATTGGCAACTATGCTGGTATTGCTTGTGGATACACAAGTCCCTTACAAGGAATAGGGAGATACACCAAGACAATTCATGAGCTAGGTTGTGCAAAAGTTGCTTGTACTGATGAAAAGCAATTCGGGAGGGCTATAAATGCAGCCCAACAAGCAGATGCTACTGTGCTTGTGATGGGCCTGGACCAGTCCATTGAAGCTGAAACCGTAGACCGGCCTGGCCTGCTTCTTCCCGGGCGTCAACAAGACCTAGTGTCCAAAGTAGCAGCTGCCTCCAAAGGCCCAATAATTTTGGTCATAATGTCTGGTGGGCCTGTAGACATTACTTTTGCAAAGAATAACCCTAAAATCCAAGGAATCTTGTGGGCCGGTTATCCCGGTCAAGCTGGTGGTGCCGCTATTGCAGATATCTTATCAAGCCGCTCAAAAGGGTACCCTGGAAGAACCTACAGATTCTACAGTGGGCCAGTGGTGTATCCATTTGGTTACGGATTGTCCTACACACACTTTATTCACACATTAGCCAGTGCCCCCAAATTGGTCTCAATTCCCGTGGACGGGCACCGCCACCGCCACAACAGTAGCTCCAACAACATCGCGAACAAAGCAATTAAGGTGACACATGCACGTTGCGGCAAGATTTCGATTACCCTCGACGTGGACGTTAAGAATGTTGGGTCCAAAGATGGCACTCACACGTTGTTAGTGTTCTCGGCACCACCCACGGGTAATGGCAACTGGGCTCCACGTAAGCAATTAGTGGCGTTTGAGAAAGTCCATGTTCCCACCAAGGCCCAACAGCGAGTCAGAGTCAATATTCATGTTTGTAAGCTCATGAGCGTGGTTGACCGGTCAGGGACTAGAAGAATTCCAATGGGTTTGCATAGTATTCACATGGGTGATGTTCAACACAAAGTGTCTCTTCAGGCAGAAACACTTGGAATCATCAAGTCTTGA 1323 0.4709 MDLNMDINHVSGLDLDCGPFLGQHTQNAVKKGLISEADVNGALLNTLTVQMRLGMYDGEPSSHPYGNLGPKDVCTPTHQDLALQAARQGIVLLKNKGPSLPLSKKRHRKVAVIGPNSNVTVTMIGNYAGIACGYTSPLQGIGRYTKTIHELGCAKVACTDEKQFGRAINAAQQADATVLVMGLDQSIEAETVDRPGLLLPGRQQDLVSKVAAASKGPIILVIMSGGPVDITFAKNNPKIQGILWAGYPGQAGGAAIADILSSRSKGYPGRTYRFYSGPVVYPFGYGLSYTHFIHTLASAPKLVSIPVDGHRHRHNSSSNNIANKAIKVTHARCGKISITLDVDVKNVGSKDGTHTLLVFSAPPTGNGNWAPRKQLVAFEKVHVPTKAQQRVRVNIHVCKLMSVVDRSGTRRIPMGLHSIHMGDVQHKVSLQAETLGIIKS 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0668 440 PANTHER SUGAR HYDROLASE-RELATED 11 260 IPR044993 GO:0009044|GO:0045493
Aed8g0668 440 SMART Fn3_like_2 354 425 IPR026891 -
Aed8g0668 440 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 11 260 - -
Aed8g0668 440 Gene3D Immunoglobulins 315 437 IPR013783 -
Aed8g0668 440 Gene3D - 159 262 IPR036881 GO:0004553|GO:0005975
Aed8g0668 440 Pfam Glycosyl hydrolase family 3 C-terminal domain 90 262 IPR002772 GO:0004553|GO:0005975
Aed8g0668 440 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 261 436 - -
Aed8g0668 440 Gene3D - 79 143 IPR036881 GO:0004553|GO:0005975
Aed8g0668 440 Gene3D - 16 78 IPR036962 GO:0004553|GO:0005975
Aed8g0668 440 Pfam Fibronectin type III-like domain 356 423 IPR026891 -
Aed8g0668 440 PANTHER SUGAR HYDROLASE-RELATED 261 436 IPR044993 GO:0009044|GO:0045493
Aed8g0668 440 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 90 292 IPR036881 GO:0004553|GO:0005975
Aed8g0668 440 SUPERFAMILY (Trans)glycosidases 11 89 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0668 Aed-Chr8 5819191 5821000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0668 11 440 Glycoside Hydrolase AT1G02640 62.256 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0668 - - gmx:100778624 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0668 8 5819191 5821000 Aed8g0668 8 5819191 5821000 ECH
Aed2g2266 2 26172953 26177167 Aed8g0668 8 5819191 5821000 PCT