Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2266 ATGTCTTCCACCTTCTCCGTCATCGTGGTCTTGCTCCTCCTCTTGCTGGTGTGCGAGGCACGTGACCCTTTCGCGTGCGACCCGAAAGATGGCGCGACGAACAAGTTGGAGTTTTGCAAGGGTTCACTGGCGATAGCGGAGAGGGTGAAGGATCTGATTGGAAGGCTGACCATGCAAGAGAAGGTTAGGCTTCTAGTGAACAATGCCGCGGCGGTTCCGAGGCTGGGGATGAAAGGGTACGAGTGGTGGTCGGAGGCGCTCCACGGGGTTTCAAATATGGGTCCCGGTGTCAAGTTTAATAAACACTTTCCCGCCGCTACTAGTTTCCCTCAAGTCATCACCACCGCTGCTTCCTTCAATGCATCTCTCTGGGAGGCTATCGGACAGGTAGTGTCAGATGAGGCAAGGGCCATGTACAACGGTGGAACAGCAGGGCTGACGTATTGGAGCCCAAACGTGAACATTTTCAGGGATCCAAGGTGGGGCCGTGGACAGGAAACACCCGGTGAGGACCCTGTGCTAGCCGGTACATATGCTGCTAGCTACGTCAGGGGCCTACAGGGAACCGACGCTAATCGCTTGAAGCTTGCCGCATGTTGCAAACACTTCACTGCTTATGATCTCGATAAATGGAACGGCATGGATCGCTTCCACTTCAATGCACAGGTGAGTAAGCAGGACATAGAGGATACATTCGACGTGCCATTCAGGATGTGTGTGAGCGAAGGCAAAGTAGCCAGCGTCATGTGTTCTTACAATCAAGTCAATGGGGTCCCTACTTGTGCCGACCCTAATCTCCTCAAGAAAACTGTTCGTGGCCTCTGGCAACTTGATGGGTACATTGTATCAGACTGTTTGGATTTAGACTGTGGGCCTTTCCTAGCGGTGCACACGCAGGATGCTGTTAAAAAAGGGTTGCTTAGCGAATCTGATGTGAATGGTGCTTTGGTGAATACACTGACGGTCCAAATGAGGTTAGGTATGTTTGATGGAGAGCCATCGGCCCATCCATATGGCAAGCTGGGCCCAAAAGATGTGTGCAAGCCGGCCCATCAAGAACTCGCTCTTGAGGCTGCCAGACAGGGAATTGTGCTACTTAAGAACACTGGTCCTGTTCTGCCACTCTCCCCACAGCATCATCATACCGTGGCTGTCATTGGACCCAATTCTAAAGCCACTGTTACAATGATTGGAAATTATGCTGGTGTTGCTTGTGGATACACCAGCCCCTTACAAGGGATAGGAAGATATGCCAAGACTATTATTCATCAGTTGGGTTGTCAAAATGTAGCTTGTAAAAACGACAAGCTATTTGGGCCTGCTATAAATGCGGCCCGTGAAGCAGATACAACGGTTTTGGTTATGGGCTTGGACCAGTCTATCGAAGCTGAAACAGTGGACAGGACTGGGTTGAATCTGCCTGGTCGTCAAGAAGAGCTAGTTTCAAAAGTGGCAGGTGCCTCAAAGGGACCAACTATTTTGGTGATAATGTCTGGTGGTTCTGTGGATATCAGTTTTGCAAAGAATAACCCTCGAATTGTGGGTATCCTGTGGGCTGGCTATCCGGGCCAAGCTGGTGGTGCTGCCATTGCAGATATACTCTTTGGAACAGTTAACCCAGGGGGCAAGCTGCCAGTGACATGGTACCCACAAGAATACCTAACAAAGGTGCCAATGACAAATATGGCAATGCGAGCAAGCAAAGCAAGAGGGTACCCAGGAAGAACGTACCGGTTCTACAATGGTCCAGTGGTGTATCCATTTGGACATGGATTAAGTTACACCCATTATGTTCATACATTAGCAAGTGCTCCCAAAGTGGTGTCAGTTCCCGTGAATGGTCACCGCCGTGCCAATGCCAATGTCACCGATACGGCGATTAGAGTAACACATGCGCGCTGCGACAAACTCTCCATCGCCCTCCAGGTGGACATTAAGAATGTGGGGTCCAGAGATGGCACGCACACGTTGCTAGTGTTCTCTGCTCCTCCAGCTGGACATTGGGAACTAGAAAAACAACTCGTGGCATTTGAGAAAATCCATGTTCCTGCCAAGGGTCAACAGAGAGTGGGAGTCAATATACACGTGTGCAAGCTTCTAAGTGTGGTGGATAAGTCTGGGATCAGGAGAATCCCATTGGGGGAACACAGTTTTCACATTGGCAATGTTAAACACTCCGTGTCGCTTCAAGCTGAAGCACTTGGGATTATCAAGTCCTGA 2220 0.5018 MSSTFSVIVVLLLLLLVCEARDPFACDPKDGATNKLEFCKGSLAIAERVKDLIGRLTMQEKVRLLVNNAAAVPRLGMKGYEWWSEALHGVSNMGPGVKFNKHFPAATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGTYAASYVRGLQGTDANRLKLAACCKHFTAYDLDKWNGMDRFHFNAQVSKQDIEDTFDVPFRMCVSEGKVASVMCSYNQVNGVPTCADPNLLKKTVRGLWQLDGYIVSDCLDLDCGPFLAVHTQDAVKKGLLSESDVNGALVNTLTVQMRLGMFDGEPSAHPYGKLGPKDVCKPAHQELALEAARQGIVLLKNTGPVLPLSPQHHHTVAVIGPNSKATVTMIGNYAGVACGYTSPLQGIGRYAKTIIHQLGCQNVACKNDKLFGPAINAAREADTTVLVMGLDQSIEAETVDRTGLNLPGRQEELVSKVAGASKGPTILVIMSGGSVDISFAKNNPRIVGILWAGYPGQAGGAAIADILFGTVNPGGKLPVTWYPQEYLTKVPMTNMAMRASKARGYPGRTYRFYNGPVVYPFGHGLSYTHYVHTLASAPKVVSVPVNGHRRANANVTDTAIRVTHARCDKLSIALQVDIKNVGSRDGTHTLLVFSAPPAGHWELEKQLVAFEKIHVPAKGQQRVGVNIHVCKLLSVVDKSGIRRIPLGEHSFHIGNVKHSVSLQAEALGIIKS 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2266 739 Gene3D Immunoglobulins 617 735 IPR013783 -
Aed2g2266 739 SMART Fn3_like_2 655 724 IPR026891 -
Aed2g2266 739 Pfam Glycosyl hydrolase family 3 N terminal domain 103 289 IPR001764 GO:0004553|GO:0005975
Aed2g2266 739 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 286 735 - -
Aed2g2266 739 PANTHER ALPHA-L-ARABINOFURANOSIDASE/BETA-D-XYLOSIDASE 6 285 - -
Aed2g2266 739 Pfam Fibronectin type III-like domain 661 722 IPR026891 -
Aed2g2266 739 PANTHER SUGAR HYDROLASE-RELATED 286 735 IPR044993 GO:0009044|GO:0045493
Aed2g2266 739 Pfam Glycosyl hydrolase family 3 C-terminal domain 363 594 IPR002772 GO:0004553|GO:0005975
Aed2g2266 739 SUPERFAMILY (Trans)glycosidases 38 362 IPR017853 -
Aed2g2266 739 PANTHER SUGAR HYDROLASE-RELATED 6 285 IPR044993 GO:0009044|GO:0045493
Aed2g2266 739 Gene3D - 28 328 IPR036962 GO:0004553|GO:0005975
Aed2g2266 739 Gene3D - 349 595 IPR036881 GO:0004553|GO:0005975
Aed2g2266 739 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 363 597 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2266 Aed-Chr2 26172953 26177167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2266 5 739 Glycoside Hydrolase AT1G02640 69.100 0.0 1098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2266 - - gmx:100789316 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2266 2 26172953 26177167 Aed2g2266 2 26172953 26177167 ECH
Aed2g2266 2 26172953 26177167 Aed8g0668 8 5819191 5821000 PCT