Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0589 ATGCTTCCTCCTCCCATTCTTTCCTTCTTCTTTCTCCTCACCATCATCACCTTCATTTCATGCACATCCACCGCCACACCCAACACCATCACTCTCCCTCTCTCTCCCTTATTCACCAACAACCACCACCACCACCCATTCCACACCCTCCAACTTGCCGCCACCACATCCATCACAAGAGCCCACCACCTCAAAAACCACAAACCAAACCCTAAACCATCATCACACCAGATCAAAACCCCAGTCCACCCCAAAACCTACGGAGGCTACTCCATCGACCTCAACTTCGGAACCCCGCCAAAAACCTTTCCCTTCGTCCTCGACACCGGCAGCACCCTCGTCTGGCTCCCCTGCTCCTCCCACTACCTCTGCTCCAAATGCAACACCTTCCCAAACACAGACAAGACCACTCCCAAGTTCATCCCCAGAAACTCCTCCTCCTCTAAGTTCGTCGGCTGTAGAAACCCTAAATGCGCCTGGGTCTTTGGCCCCGACGTCGGGTCCCACTGTTGCAACCAACAGAATGCCTCTAATAACCATAAATGTTCCAATATGTGTCCCGCCTACACCGTGCAGTACGGCCTCGGCTCCACGGCCGGATTCCTACTCTCAGAACACCTCAATGTTGATTTCAAAATCTTTCCCGACTTCCTCCTCGGATGCTCTGTCGTGTCAGTCTACCAGCCGGCCGGAATCGCGGGATTTGGCCGCGGACCGGAGTCGCTCCCGGCGCAGATGAACCTCACTAGATTCTCCTACTGCTTACTCTCTCACAACTTCGACGATTCTCCAACAACAACCAGCGACCTCGTGTTAGAAACTGCATCCACAGGTGAATTCAAAAAAATCAACGGCGTCAGCTACACTCCATTTCTGAAAAACCCGTCCGATAAAAACCCCGTGTTCGGCGCGTACTATTACGTTACTCTTAAGAGAATCATCGTTGGAGAGAAGCGCGTGAGGATTCCGAAGAGGCTTCTGGAACCGGACGCTAGCGGCGACGGGGGTTTCATCGTTGACTCCGGGTCAACGTTCACGTTCATGGAGAGACCGATTTTCGATCTGGTGGCGCGGGAGTTCGCGGAGCAGGTGAACTACACGCGCGCGAGGGAGGCTGAGAAGCGATCTGGACTGAGTCCGTGTTTTGTGATGCCGGCGGGTGCGGAAACGGCGTCGTTCCCCGAGCTGAGGTTTGAGTTCCGGGGCGGCGCGAAGATGAGGCTGCCGGTGGCGAATTATTTCTCGCTGGTCGGGAAGGCTGACGTGGCGTGCTTGACGGTTGTGTCTGATGACGTGGCGGGTCCAGATTCGGCGGTGGGACCCGCTGTGATATTGGGGAACTATCAGCAGCAGAATTTCTACGTTGAGTATGATTTGGAGAATGAGAGAGGGACCAATTTGATTGAATATCTAAAGATTAATAAGAGAATCTACTTTTAA 1440 0.5354 MLPPPILSFFFLLTIITFISCTSTATPNTITLPLSPLFTNNHHHHPFHTLQLAATTSITRAHHLKNHKPNPKPSSHQIKTPVHPKTYGGYSIDLNFGTPPKTFPFVLDTGSTLVWLPCSSHYLCSKCNTFPNTDKTTPKFIPRNSSSSKFVGCRNPKCAWVFGPDVGSHCCNQQNASNNHKCSNMCPAYTVQYGLGSTAGFLLSEHLNVDFKIFPDFLLGCSVVSVYQPAGIAGFGRGPESLPAQMNLTRFSYCLLSHNFDDSPTTTSDLVLETASTGEFKKINGVSYTPFLKNPSDKNPVFGAYYYVTLKRIIVGEKRVRIPKRLLEPDASGDGGFIVDSGSTFTFMERPIFDLVAREFAEQVNYTRAREAEKRSGLSPCFVMPAGAETASFPELRFEFRGGAKMRLPVANYFSLVGKADVACLTVVSDDVAGPDSAVGPAVILGNYQQQNFYVEYDLENERGTNLIEYLKINKRIYF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0589 479 PANTHER BNACNNG47670D PROTEIN 8 463 - -
Aed8g0589 479 SUPERFAMILY Acid proteases 85 463 IPR021109 -
Aed8g0589 479 CDD pepsin_A_like_plant 89 463 IPR034161 -
Aed8g0589 479 Pfam Xylanase inhibitor C-terminal 306 463 IPR032799 -
Aed8g0589 479 Gene3D Acid Proteases 69 267 IPR021109 -
Aed8g0589 479 ProSiteProfiles Peptidase family A1 domain profile. 90 467 IPR033121 -
Aed8g0589 479 PRINTS Pepsin (A1) aspartic protease family signature 443 458 IPR001461 GO:0004190|GO:0006508
Aed8g0589 479 PRINTS Pepsin (A1) aspartic protease family signature 337 348 IPR001461 GO:0004190|GO:0006508
Aed8g0589 479 PRINTS Pepsin (A1) aspartic protease family signature 96 116 IPR001461 GO:0004190|GO:0006508
Aed8g0589 479 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 105 116 IPR001969 GO:0004190|GO:0006508
Aed8g0589 479 Pfam Xylanase inhibitor N-terminal 90 260 IPR032861 -
Aed8g0589 479 PANTHER OS07G0603500 PROTEIN-RELATED 8 463 - -
Aed8g0589 479 Gene3D Acid Proteases 276 465 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0589 Aed-Chr8 5070310 5072114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0589 88 463 Miscellaneous Gene Families AT1G44130 23.601 1.19e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0589 - - gmx:100808552 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0589 8 5070310 5072114 Aed8g0589 8 5070310 5072114 ECH
Aed2g2023 2 24668009 24669433 Aed8g0589 8 5070310 5072114 PCT