Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0577 ATGATTTACATTGCGAAAATCTTCACCCTTTTCATTCATCAAATCCCTTGTTTTTCCTTGCGCTGCTTTATTCCTATTCCCATTTCCCACCTTTCCTTCCCATCATCATCGTCATTCTTCATCATCACCTTGCAGATTCTCTCTCCATCATTCCTCTCCTCTTCCCCCAAATTTCGATCAGATCCGCACCACCAAAACCCTAAGGCAACCAACCCATCCATGACGCTTGGCTCGGGAGGATCCAGTGTCGTGGTTCCTAGGAACTTCAGATTGCTGGAGGAGCTTGAACGTGGAGAAAAAGGGATTGGAGATGGCACGGTTAGCTATGGAATGGATGATGGTGATGACATTTACATGCGCTCTTGGACTGGCACCATTATTGGCCCCCATAATACTGTACATGAAGGAAGAATTTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGGATCAACATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAAAAATTTGGTCTTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGATATACTGACGCAGCTGAAGAAGGAAATGGCCACTCCTCATAACCGGAAGCTTGTCCAGCCTCCAGAAGGTACCTACTTTTAG 660 0.4485 MIYIAKIFTLFIHQIPCFSLRCFIPIPISHLSFPSSSSFFIITLQILSPSFLSSSPKFRSDPHHQNPKATNPSMTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMATPHNRKLVQPPEGTYF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0577 219 MobiDBLite consensus disorder prediction 57 81 - -
Aed8g0577 219 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 83 213 - -
Aed8g0577 219 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 86 219 IPR000608 -
Aed8g0577 219 SUPERFAMILY UBC-like 84 219 IPR016135 -
Aed8g0577 219 Gene3D Ubiquitin Conjugating Enzyme 74 219 IPR016135 -
Aed8g0577 219 Pfam Ubiquitin-conjugating enzyme 116 209 IPR000608 -
Aed8g0577 219 PANTHER - 83 213 - -
Aed8g0577 219 SMART ubc_7 89 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0577 Aed-Chr8 4954602 4957935 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0577 K10704 - gmx:100816570 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0577 8 4954602 4957935 Aed8g0577 8 4954602 4957935 ECH
Aed2g2017 2 24614408 24618361 Aed8g0577 8 4954602 4957935 PCT