Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2017 GTCCATTTCCTATTTCTTCGTTATTCCAACATTTGCCTTCGCTGCCAATTTCTTCTGCATACACCGATTCCCCTCTTTCTCAGATATTTCAAATTTCGATACTTTGATCAGATCCACAACACTCGTTCATCCATGACGCTTGGCTCTTCGGGATCCAGTGTCGTGGCTATGTCCTCTGCTATTTCTTTATGTATTGAAGCTGAAGCTGACATGTGGGTGGTTCCAAGGAACTTCAGATTGCTGGAGGAGCTTGAGAAGGGAGAAAAAGGAATTGGAGATGGCACAGTTAGCTATGGAATGGATGACGGTGATGACATTTTCATGCGCTCTTGGACTGGAACCATTATTGGCCCCTATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCAAGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAATCAAAGAAGTTTGGTCTTCTTGCAAATTGGCAACGAAGGTTTACCATGGAAGATATACTGACCCAGCTGAAGAAGGAAATGGCGGCTTCACAAAACCGCAAGCTTGTCCAGCCTCCTGAAGGTACTAACTATTAA 627 0.4258 VHFLFLRYSNICLRCQFLLHTPIPLFLRYFKFRYFDQIHNTRSSMTLGSSGSSVVAMSSAISLCIEAEADMWVVPRNFRLLEELEKGEKGIGDGTVSYGMDDGDDIFMRSWTGTIIGPYNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQRRFTMEDILTQLKKEMAASQNRKLVQPPEGTNY 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2017 208 Pfam Ubiquitin-conjugating enzyme 106 196 IPR000608 -
Aed2g2017 208 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 71 202 - -
Aed2g2017 208 SMART ubc_7 78 208 - -
Aed2g2017 208 Gene3D Ubiquitin Conjugating Enzyme 62 208 IPR016135 -
Aed2g2017 208 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 75 208 IPR000608 -
Aed2g2017 208 SUPERFAMILY UBC-like 71 208 IPR016135 -
Aed2g2017 208 PANTHER - 71 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2017 Aed-Chr2 24614408 24618361 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2017 K10704 - gmx:100789495 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2017 2 24614408 24618361 Aed2g2017 2 24614408 24618361 ECH
Aed2g2017 2 24614408 24618361 Aed8g0577 8 4954602 4957935 PCT