Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0505 ATGGAATCATCATCGTTTCAAGGCGCGAGGAACGACATTACCTCCCAAGTGGGTTTGGTTTGGAGCCAAGTGAAGGAGCCAGTGATCGTGCCACTGCTGAGAGTGGCAGTGTTCCTCTGCTTGGCCATGTCGTTGATGATGCTGGTCGAGAGGGTCTACATGGGCTTCGTCATTTGCCTGGTGAAGCTCTTCGGTCGAAGACCAGAGAAGCGTTACAAGTGGGAGCCAACGAAGGACGATGTCGAGTTGGGAAACTCAACTTATCCCATGGTCCTGGTCCAAGTCCCAATGTACAACGAAAGAGAGGTTTTTCAACTGTCAATTGGTGCTGCTTGTGGCCTTTCTTGGCCTTCAGATAGAATCATCGTACAAATCCTTGACGACTCGACTGATCCAACAATCAAAGAGCTGGTGCAAATGGAATGTAGCAGATGGGCGAGCAAAGGGGTGAACATAAAGTACGAGGTGAGGGACAATAGGAATGGGTACAAAGCTGGGGCTCTGAAAGAAGGCATGAAACGAAGCTACGTGAAGCAGTGTGACTATGTTGCGATCTTTGACGCGGATTTTCAACCGGAGCCTGATTTTCTCTGGCGAACTGTCCCATTCCTTGCCAACAACCCTGAGCTTGGTCTCGTTCAGGCACGCTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACCAGGATGCAAGAGATGTCACTGGATTACCATTTCACTGTGGAACAAGAAGTGGGGTCTGCCACTTACGCCTTCTTTGGCTTCAACGGAACTGCGGGTGTATGGAGAATTTCGGCTCTGAATGAGGCTGGAGGGTGGAAGGATAGGACGACAGTGGAAGATATGGACCTGGCTGTCCGAGCCAGTCTCAAGGGATGGAAATTCTTGTACCTGCCCAATTTGAAGGTTAAAAATGAATTGCCAAGTACTTTGAAGGCCTACCGCTACCAACAGCACAGGTGGTCTTGTGGACCAGCCAATCTGTTCAAGAAAATGGTCATGGAGATTATGAGAAACAAGGTAAGGGTTGCTCCCTCCTTTGGAATTTGGAAGGACAAGAAGTATTGGCTATTTATGAGTTTTGAAGTTATGACCAAAATTCTTGTGTGTCCATTGCAGAAAGTGTCCTTGTGGAAGAAGATATATGTGGTTTACAGCTTCTTCTTTGTCCGGAAGGTTGTGGCCCACATAAACACTTTTGTGTTCTATTGCATTGTGTTGCCTGCAACAGTTGTGGTGCCTGAGGTGTCTGTCCCCAAGTGGGGTGCTGTGTATATTCCTTCCATCATCACACTCCTAAATGCTGTTGGAACTCCAAGGTCACTCCACTTACTGGTCTTTTGGATTCTCTTTGAGAATACCATGTCTCTCCATAGAACAAAGGCAACAATTATTGGTCTACTAGAGGCTAGTCGAGTGAATGAGTGGGTTGTCACAGAAAAACTTGGAGATGCTCTTAAGGGTAAAGGTGGTGGCAAAGCAACAAAGAAGATTCGGCTTCACATGTTAGAACTTATTGTTGGATTCTACCTCTTCTTCTGTGGCTGCTATGATGTTATGTTTGGGAAAAACCACTTCTACATATTCCTATATATCCAATCAATTGCTTTCTTCATCATGGCATTTGGATATGTTGGCACTTTCGTTCCCAGTTCCTAG 1659 0.4629 MESSSFQGARNDITSQVGLVWSQVKEPVIVPLLRVAVFLCLAMSLMMLVERVYMGFVICLVKLFGRRPEKRYKWEPTKDDVELGNSTYPMVLVQVPMYNEREVFQLSIGAACGLSWPSDRIIVQILDDSTDPTIKELVQMECSRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTVPFLANNPELGLVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSATYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLPNLKVKNELPSTLKAYRYQQHRWSCGPANLFKKMVMEIMRNKVRVAPSFGIWKDKKYWLFMSFEVMTKILVCPLQKVSLWKKIYVVYSFFFVRKVVAHINTFVFYCIVLPATVVVPEVSVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEASRVNEWVVTEKLGDALKGKGGGKATKKIRLHMLELIVGFYLFFCGCYDVMFGKNHFYIFLYIQSIAFFIMAFGYVGTFVPSS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0505 552 PANTHER - 372 551 - -
Aed8g0505 552 PANTHER - 5 369 - -
Aed8g0505 552 Pfam Glycosyl transferase family group 2 182 391 IPR001173 -
Aed8g0505 552 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 305 IPR029044 -
Aed8g0505 552 SUPERFAMILY Nucleotide-diphospho-sugar transferases 88 389 IPR029044 -
Aed8g0505 552 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 372 551 - -
Aed8g0505 552 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 5 369 - -
Aed8g0505 552 CDD CESA_CaSu_A2 89 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0505 Aed-Chr8 4293293 4299849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed8g0505 4 551 Miscellaneous Gene Families AT5G03760 72.973 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0505 K13680 - gmx:100808118 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0505 8 4293293 4299849 Aed8g0505 8 4293293 4299849 ECH
Aed2g1935 2 23911649 23917253 Aed8g0505 8 4293293 4299849 PCT