Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1935 ATGGATCGCTTTTCTTCTTCCAGTACCATTTTACCCGAAGCGTTTCAAGGGGCCAAAGATGACTTCACCATGCAGCTTGCATTGGTTTGGAACCAAATCAAAGCGCCACTGATAGTCCCGTTGCTGAGACTAGCAGTGTTTCTGTGCTTGATCATGTCGGTGATGATGTTCATTGAGAGGGTCTACATGGGCATTGTCATCACATTGGTGAAGTTGTTCGGAAGAAAGCCAGAGAAACGTTACAAATGGGAGCCAATGAAGGACGACATAGAGTTGGGTAACTCCTCTTACCCAATGGTTCTTGTTCAAGTCCCCATGTATAACGAAAGAGAGGTTTATCAGTTATCTATTGGAGCAGCATGTGGGCTTTCTTGGCCTTCAGATAGGATCATCATACAGGTCCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAGCTTGAATGCCAAAGATGGGCAAGCAAAGGGGTGAACATAAAGTATGAAGTTAGAGACAACAGAAATGGGTACAAAGCAGGGGCTCTGAAAGAAGGCATGAAGAGAAGCTACGTGAAACAATGTGACTGTGTTGCTATCTTTGATGCTGATTTTCAACCAGAGCCTGATTTCCTGTGGCGGACCGTTCCATTCTTACTGCACAATCCCGAATTAGCCCTCATTCAAGCGCGTTGGAAATTTGTGAATTCCGATGAATGTTTGATGACCAGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGATTCAACGGGACTGCGGGAGTATGGAGAATTGCGGCGCTGAATGAGGCTGGTGGATGGAAAGATAGGACCACAGTTGAAGATATGGACTTGGCTGTGCGAGCCAGTCTCAAGGGATGGAAATTCTTATACTTGTCTGACTTGAAGGTTAAAAATGAGTTGCCAAGTACTTTAAAGGCCTACCGCTACCAACAGCACCGTTGGTCTTGTGGTCCAGCCAATCTTTTTAGGAAAATGGTCATGGAGATCATAAACAACAAGAAAGTGACACTGTGGAAGAAGATACATGTGGTTTACAGCTTCTTCTTTGTTCGGAAGGTTGTAGCACACATCAACACCTTTGTGTTCTATTGCATTGTATTGCCTGCAACAGTTTTGGTTCCTGAGGTTGTGGTCCCAAAGTGGGGAGCTGTCTATATCCCTTCTGTCATCACTATTCTAAATGCAGTTGGAACTCCAAGGTCACTCCATTTGCTGGTCTTCTGGATTCTCTTTGAGAATGTCATGTCTCTGCATAGAACAAAGGCAACGATTATTGGTCTGCTAGAGGCTAGTCGAGTGAACGAATGGGTTGTCACTGAAAAACTTGGTGATGCTCTCAAGGCTAAAGCAGGAGGTAAAGCACCTAAAAAGCCTCGATTCAGAATTGGAGACAGGATTCACTTGTTGGAACTTGGTGTCGCATTCTACCTCTTCTTTTGTGGCTGCTATGATGCTATGTTCGGGAAAAACCACTACTTCATCTTCCTCTTTATCCAATCTCTTGCCTTCTTGATCATGGCATTTGGATATGTTGGCACCATTGTTCCCAACTCCTAG 1605 0.4461 MDRFSSSSTILPEAFQGAKDDFTMQLALVWNQIKAPLIVPLLRLAVFLCLIMSVMMFIERVYMGIVITLVKLFGRKPEKRYKWEPMKDDIELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDCVAIFDADFQPEPDFLWRTVPFLLHNPELALIQARWKFVNSDECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRIAALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIINNKKVTLWKKIHVVYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSVITILNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWVVTEKLGDALKAKAGGKAPKKPRFRIGDRIHLLELGVAFYLFFCGCYDAMFGKNHYFIFLFIQSLAFLIMAFGYVGTIVPNS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1935 534 PANTHER - 10 533 - -
Aed2g1935 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 374 IPR029044 -
Aed2g1935 534 Pfam Glycosyltransferase like family 2 99 333 - -
Aed2g1935 534 PANTHER BNAC09G36340D PROTEIN 10 533 - -
Aed2g1935 534 CDD CESA_CaSu_A2 98 334 - -
Aed2g1935 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 314 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1935 Aed-Chr2 23911649 23917253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g1935 3 533 Miscellaneous Gene Families AT5G03760 80.827 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1935 K13680 - gmx:100782772 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1935 2 23911649 23917253 Aed2g1935 2 23911649 23917253 ECH
Aed2g1935 2 23911649 23917253 Aed8g0505 8 4293293 4299849 PCT