Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0494 ATGGGCGCGTCGCTGTCGACGAACGGTTCGAGCATCGGTCCGGGCCTCGGGGACATACCGGAGAGCTGCGTGGCGTGCGTGTTCCTCTACCTGACGCCGCCGGAGATTTGCAACCTCGCCCGCCTCAACCGCGCGTTCCGCGGCGCCGCCTCGTCGGACTCCGTCTGGGAGGCCAAGCTGCCGCGCAACTACCAGGATCTGCTGGATCTGGTCCCGCCGGAGCGCCACCGCAGCCTCTCCAAAAAGGACATCTTCGCACTCCTCTCGCGGCCGCTTCCATTCGACCACGGCCATAAGGTGGGTGGTGCAATTCAGGAAGTGTGGCTGGACAGGGTCACCGGAAGGGTTTGCATGTCCATTTCGGCGAAGGCGTTGGCGATTACCGGAATCGATGACCGGAGATACTGGAATTGGATTCCTACCGAAGAATCTAGGTTTCACACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGAGAGGTAAAGTTTCCATTTCCCACTGATATTTATACTCTCTCCTTTAGGCTTCACCTTGGACGGTTTTCCAAAAGGCTTGGGCGGCGTGTTTGCAACCATGAACACACTCATGGTTGGGATATAAAACCTGTGAAGTTTGAGTTTTCTACTTCTGATGGTCAGCAAGCATCATGTGAATGGTGTTTGGATGAAACTGAGATTGATGATACATATGGCAATCATAAGCGTGGATACTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGTGGATCAGAGCCTACAACTCAAGTTAGGTTTTCCATGAAACAGATTGATTGTACACATTCCAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTGTACCTAGTGATTTGAGAGAGCGCAAGAGAAGAGGCATTTTGAAATAG 897 0.5151 MGASLSTNGSSIGPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASSDSVWEAKLPRNYQDLLDLVPPERHRSLSKKDIFALLSRPLPFDHGHKVGGAIQEVWLDRVTGRVCMSISAKALAITGIDDRRYWNWIPTEESRFHTVAYLQQIWWFEVDGEVKFPFPTDIYTLSFRLHLGRFSKRLGRRVCNHEHTHGWDIKPVKFEFSTSDGQQASCEWCLDETEIDDTYGNHKRGYWVDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDSVFIVPSDLRERKRRGILK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0494 298 PANTHER F-BOX PROTEIN PP2-A15 1 296 - -
Aed8g0494 298 ProSiteProfiles F-box domain profile. 13 59 IPR001810 GO:0005515
Aed8g0494 298 SUPERFAMILY F-box domain 14 82 IPR036047 GO:0005515
Aed8g0494 298 Pfam Phloem protein 2 116 285 IPR025886 -
Aed8g0494 298 PANTHER F-BOX PROTEIN PP2-A15 1 296 - -
Aed8g0494 298 SMART fbox_2 19 59 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0494 Aed-Chr8 4199653 4203678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0494 - - vra:106772440 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1926 2 23833994 23836874 Aed8g0494 8 4199653 4203678 PCT