Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1926 ATGGGGACCTCGCTGTCGAACCTAGGAAGCAACGGTTCGGCTGCCGCTCCGGGCCTCGGCGACATCCCGGAGAGTTGCGTCGCTCGCGTCTTTCTTCACCTCACTCCGCCGGAGATTTGCAACCTCGCCCGCCTCAGCCGAGCCTTTCGCGGCGCCGCCTCGGCGGACTCCGTCTGGCAGACGAAGCTGCCTCGCAACTACCAAGATCTGCTCGATATAGTGCCTCCCGAGAGGTACCGGAATCTCTCCAAGAAGGACATCTTCGCGCTGCTCTCTCGGCCACTGCCCTTCGATGACGCCAACAAGGAAGTGTGGCTGGATAGGGTTACCGGAAGGGTTTGCATGTCAATTTCCGCGAAGGCCATGTCTATTACTGGAATTGATGACCGCAGATACTGGACTTGGGTTCCTACTGAAGAATCTAGGTTCAACACTGTAGCATATTTGCAGCAGATATGGTGGTTTGAAGTGGATGGGGAGGTCAGCTTTCCCTTTCCTGCTGATATTTATACTCTCTCTTTTAGGCTTCACCTTGGACGATTTTCCAAGAGGCTTGGTCGACGTGTCTGCAGTTATGAACACACCCATGGTTGGGATATAAAACCAGTGAGATTTGAGTTGTCAACCATGGATGGTCAGCAAGCATCATTTGAGTGCTACTTGGGTGAAACTGAACCTGATGATGCACACGGCAATCATAAGCGTGGACATTGGGTAGATTACAAGGTGGGTGAGTTTATTGTCAGTGGATCAGAACCTACAACTAAAGTAAGATTCTCCATAAAACAGATTGATTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATGTATTATACCAAGTGATTTGAGAGAGCGCATGAGAAGTGGCATTCTGAAATAA 888 0.5023 MGTSLSNLGSNGSAAAPGLGDIPESCVARVFLHLTPPEICNLARLSRAFRGAASADSVWQTKLPRNYQDLLDIVPPERYRNLSKKDIFALLSRPLPFDDANKEVWLDRVTGRVCMSISAKAMSITGIDDRRYWTWVPTEESRFNTVAYLQQIWWFEVDGEVSFPFPADIYTLSFRLHLGRFSKRLGRRVCSYEHTHGWDIKPVRFELSTMDGQQASFECYLGETEPDDAHGNHKRGHWVDYKVGEFIVSGSEPTTKVRFSIKQIDCTHSKGGLCVDSVCIIPSDLRERMRSGILK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1926 295 PANTHER F-BOX PROTEIN PP2-A15 1 288 - -
Aed2g1926 295 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 288 - -
Aed2g1926 295 Gene3D - 14 110 - -
Aed2g1926 295 Pfam Phloem protein 2 113 282 IPR025886 -
Aed2g1926 295 SUPERFAMILY F-box domain 15 88 IPR036047 GO:0005515
Aed2g1926 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Aed2g1926 295 SMART fbox_2 22 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1926 Aed-Chr2 23833994 23836874 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1926 - - gmx:100807328 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1926 2 23833994 23836874 Aed2g1926 2 23833994 23836874 ECH
Aed2g1926 2 23833994 23836874 Aed8g0494 8 4199653 4203678 PCT