Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0451 ATGTTCAAGAAAATCATGAAAGGCGGGAACAAGAAGCCCTCCAAGTCCGACGATCCGGTCCCGTCGCCGTACGCCGCTCCGGCGGCGCCCTCCGCCAATGTCGTCATGAACCACGCCTCGCGCGGCGGCGGCGGCGGCGGAACCGCGGGGCCGAATTCCGTCGCCTCGACACCGCTGACTCTCGCCACCGGCGGGCCGATGGAGCCGGTGCCACTGTTCCGCGACACGCCCGTCGCGGAGCGCCAGAGCTTCTTCCTCAAGAAGCTCCGCGTGTGCTGTTACGTCCTGGACTTCTCCGACACGCTGAAGAACGTTAGGGAGAAGGAAATCAAACGCCAGGCGCTGATGGATTTGGTGGATTTTATCCAATCTGGTTCCGGCAAGATAAACGAGAATTGCCAGGAGGATATGATCAGAATGATCTCGGTCAACATTTTCCGGTGCCTCCCTCCGGCGTCGCACGAGAACACCGGCCAGGAACCCACTGATCCCGAGGAGGAGGAACCCTCCCTTGACCCATCCTGGCCCCACCTTCAGCTCGTCTACGAGCTTCTCCTCAGATACGTCGTTTCCTCCGACACCGATACGAAGATCGCGAAACGGTACATCGACCACTCCTTCGTTCTGAAATTGCTCGATTTGTTCGCCTCCGAGGACCCGCGTGAGAGGGAGTATTTGAAAACCATACTGCATCGTATATACGGGAAATTCATGGTTCATAGGCCCTTTATTAGGAAAGCTATTAACAACATTTTTTACCGCTTTATATATGAGACTGAGAGGCACTCTGGCATTGGGGAGCTTCTGGAGATTCTCGGGAGCATTATTAATGGGTTCGCGCTGCCCATGAAGGAGGAGCACAAGTTGTTCCTTGTGAGGGCGCTTCTGCCTCTGCATAAGCCGAAATCCGTTGGGATGTACCAGCAACAGCTGTCTTACTGCATTACTCAGTTTGTGGAGAAGGATTTCAAGCTCGCGGATACGGTGATTAGGGGCTTGTTGAAGTATTGGCCTGTTACCAATTGCCAGAAGGAGGTTCTCTTCCTCGGAGAACTTGAGGAGGTGCTGGAGGCCACGCAGACCGCCGAGTTTCAGCGGTGCATGGTTCCGCTATTTAGACAGATTTCACGCTGCCTCAATAGCTCTCACTTTCAGGTTGCAGAACGAGCCCTCTTTTTGTGGAACAACGAGCATATTGTGGGCTTAATGGCCCAAAACAGGACTGTGGTGCTACCAATAATATTTGAAGCATTTGAGAAAAATATTTCGAGTCATTGGAATCAGGCAGTGCATGGACTGACCGTGAATGTTCGCAAAATGTTCCAGGAAATGGATGCAGAATTGTTCGAAGAGTGCCAGCGGCAGCACGCAGAGAAAATGGCTAAAGCCAAAGAAGTAGCAGAGCAGAGGGAACTTAATTGGAATAGACTGGCAGACGCAGCTGCACAGAACGGAGTGGAGGACATGGTCACAACTTAA 1479 0.5308 MFKKIMKGGNKKPSKSDDPVPSPYAAPAAPSANVVMNHASRGGGGGGTAGPNSVASTPLTLATGGPMEPVPLFRDTPVAERQSFFLKKLRVCCYVLDFSDTLKNVREKEIKRQALMDLVDFIQSGSGKINENCQEDMIRMISVNIFRCLPPASHENTGQEPTDPEEEEPSLDPSWPHLQLVYELLLRYVVSSDTDTKIAKRYIDHSFVLKLLDLFASEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVGMYQQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQTAEFQRCMVPLFRQISRCLNSSHFQVAERALFLWNNEHIVGLMAQNRTVVLPIIFEAFEKNISSHWNQAVHGLTVNVRKMFQEMDAELFEECQRQHAEKMAKAKEVAEQRELNWNRLADAAAQNGVEDMVTT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0451 492 SUPERFAMILY ARM repeat 82 459 IPR016024 -
Aed8g0451 492 MobiDBLite consensus disorder prediction 153 172 - -
Aed8g0451 492 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 71 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed8g0451 492 MobiDBLite consensus disorder prediction 1 58 - -
Aed8g0451 492 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 486 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed8g0451 492 PIRSF PP2A_B56 11 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed8g0451 492 Gene3D - 77 480 IPR011989 -
Aed8g0451 492 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0451 Aed-Chr8 3809676 3816504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0451 K11584 - gmx:100795277 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed8g0451 8 3809676 3816504 Aed8g0451 8 3809676 3816504 ECH
Aed2g1887 2 23523513 23529272 Aed8g0451 8 3809676 3816504 PCT