Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g1887 ATGTTCAAGCGAATGATGAAGGGAGGAGGGCAGAAGAAGCCCTCAAAGGACATGAACGATCCGTCATCCTTCGCTCCGGCGGGGGCGGTGACAGACACTGCGGCGGTGGTGGTTCCTCCGCCATCGGGCACCATAGAGCCGCTCCCTCTCTTCCGCGATGTGGCGGTCTCGGAGCGGCAGAACCTCTTCATCCGGAAGCTCCAGATATGCTGCCACGTGTTGGACTTCTCTGACACGCTGAAATCCGTGCGAGAGAAGGAAATCAAGCGACAGACTCTAATGGAGCTGGTGGATTTCATTCAATCGGGCTCCGGGAAGATAACAGAGACTTGCCAGGAAGAGATGATCAAAATGGTGTCGGCCAACATTTTCCGGTGCCTCCCGCCGGCGTCGCACGAGAACACCGGCCAGGAGGCCACCGATCCGGAGGAGGAGGAGCCCTGCCTCGAGCCCGCCTGGCCCCACTTGCAGCTCGTCTACGAGCTTCTCCTCAGATACGTAGTTTCCTCCGACACTGACACAAAGGTTGCGAAACGGTATATCGATCATTCCTTTGTTCTCAAACTGCTTGATTTGTTTGACTCTGAGGACCCTCGCGAGCGTGAGTATTTGAAAACCATATTGCACCGCGTCTACGGGAAATTCATGGTGCATCGTCCCTTCATTAGGAAGGCCATTAACAACATATTCTTTCGGTTTATATATGAGACGGAGCGGCATAGTGGTATTGGGGAGCTTCTTGAGATTCTGGGGAGTATTATTAATGGGTTTGCGCTTCCGATGAAGGAGGAGCATAAGTTGTTTCTTGCCAGGGCGCTTGTGCCTCTGCATAAGCCCAAGCCCGTTGGGATTTACCACCAGCAGTTGTCGTATTGCATTGCGCAGTTTGTGGAGAAGGATTTCAAGCTCGCCGATACGGTTATTAGGGGCTTGTTGAAGTACTGGCCCGTCACGAATTGCCAGAAGGAGGTTCTCTTCCTTGGGGAACTGGAGGAGGTGCTGGAGGCAACGCAGGCCTCCGAGTTCCAACGCTGCATGGTACCTCTTTCTAGACAGATTGCCCGCTGCCTCAATAGTTCTCACTTTCAGGTTGCAGAACGAGCTCTGTTTTTGTGGAATAATGAACACATTGTCGGCTTAATGGCCCAAAACAGGACTGTAGTATTACCCATACTATTCGAAGCATTGGAGAAAAATATCAAGTCTCATTGGAACCAGGCTGTTCACGGGTTGACTGTGAATGTTCGAAAAATGTTCATAGAAATGGATGCAGAATTATTTGAAGAGTGTCAGAGACAGTATGCAGAAAAGGAGGCCAAAGCAAAAGAATTAGAAGAGCAGCGAGAATGGAATTGGAAAAGACTGGCAGATGCAGCTGCACAGAATGGGGTGGATATGGTCACAGCTTAG 1410 0.5106 MFKRMMKGGGQKKPSKDMNDPSSFAPAGAVTDTAAVVVPPPSGTIEPLPLFRDVAVSERQNLFIRKLQICCHVLDFSDTLKSVREKEIKRQTLMELVDFIQSGSGKITETCQEEMIKMVSANIFRCLPPASHENTGQEATDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRVYGKFMVHRPFIRKAINNIFFRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLARALVPLHKPKPVGIYHQQLSYCIAQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQASEFQRCMVPLSRQIARCLNSSHFQVAERALFLWNNEHIVGLMAQNRTVVLPILFEALEKNIKSHWNQAVHGLTVNVRKMFIEMDAELFEECQRQYAEKEAKAKELEEQREWNWKRLADAAAQNGVDMVTA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g1887 469 Coils Coil 427 447 - -
Aed2g1887 469 PIRSF PP2A_B56 17 467 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed2g1887 469 MobiDBLite consensus disorder prediction 1 25 - -
Aed2g1887 469 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 48 459 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed2g1887 469 Gene3D - 56 458 IPR011989 -
Aed2g1887 469 SUPERFAMILY ARM repeat 60 441 IPR016024 -
Aed2g1887 469 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 468 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed2g1887 469 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g1887 Aed-Chr2 23523513 23529272 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g1887 K11584 - gmx:100798308 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g1887 2 23523513 23529272 Aed2g1887 2 23523513 23529272 ECH
Aed2g1887 2 23523513 23529272 Aed8g0451 8 3809676 3816504 PCT