Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed8g0340 ATGGAGTCTCTCCCTAAAATTAATCACTCTCACCTCTCACTGAAACTCAATCACTCAGTACTTCAACGAGCTTCTAAGTTCAATCGTTCTTCATTGCCATCCCTCTTCTCTTCCCTCCCTCCATTCTCTCCCATCAGAGCCTCGTCACCATCACACAACGCATTTCACAAACCCCACCAAAACCCTATTCTCTCCCCTCTCGTCAAACCCGCCTGCATCGCCATAGCCGCCACCGCATTCTTCCTCACGCGTCTTCCCTCTCCCCCCGTCGCCGCTGCTTCACCGCCGCCGGAGCCCGCCGCGTTGGAAATTCTCCCCAACGAAAGCGCCACCGAAGAGATACCAAGCACTGACACCGAAACCGAAATCGACGCGCTTCAATCGCTCCTGCAGGACAAGATCAGAGCCCGCGATATCGACGAAGCGATTGTCATCCTAGACCGTCTGATCGAGCTCGAACCAGAGGATTCGGAGTACCCGCTCCTGAAGGCGCACCTGCACATGCGCTACGGAGAGCACGAACTCGCCGCGAAATTGTTCGAGGAATTGCTTCTTAAAGACCCCTTCCACGTGGAGGCCTATCGCGGCCTTGTGATGCTGACTTCGGAGACGAACAAGCCAACCGGAGAACTGCTAAACATAATCGAAGAGGCCGCGAAGGCTTGCGAGGAGCAAGAGAGGGATTCCGATGCGAGGGACCTTAAGTTGCTGATTGCGCAGATATTGGTCATCGATGGGGATTTATCCGATGCGCTGAAGGTCTACGAGCACCTTGTGAGGGAAGAGCCAAAGGATTTCAGACCTTACTTGTGTCAGGGTATTGTGTATACCATTTTGAGAATGAAAGATGAAGCTGAGAAACAGTTCGAGAAGTATCGAAGTCTTGTTCCCGAGGATCATCCTTATAAGCAGTATTTCGAGGACAATACTCAGTTTCTGGAGATGAGAGGAGTAAGTGCAAAGAGTTGA 969 0.5201 MESLPKINHSHLSLKLNHSVLQRASKFNRSSLPSLFSSLPPFSPIRASSPSHNAFHKPHQNPILSPLVKPACIAIAATAFFLTRLPSPPVAAASPPPEPAALEILPNESATEEIPSTDTETEIDALQSLLQDKIRARDIDEAIVILDRLIELEPEDSEYPLLKAHLHMRYGEHELAAKLFEELLLKDPFHVEAYRGLVMLTSETNKPTGELLNIIEEAAKACEEQERDSDARDLKLLIAQILVIDGDLSDALKVYEHLVREEPKDFRPYLCQGIVYTILRMKDEAEKQFEKYRSLVPEDHPYKQYFEDNTQFLEMRGVSAKS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed8g0340 322 MobiDBLite consensus disorder prediction 92 119 - -
Aed8g0340 322 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 318 - -
Aed8g0340 322 Gene3D Tetratricopeptide repeat domain 91 320 IPR011990 GO:0005515
Aed8g0340 322 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 318 - -
Aed8g0340 322 SUPERFAMILY TPR-like 134 299 IPR011990 GO:0005515
Aed8g0340 322 SMART tpr_5 123 156 IPR019734 GO:0005515
Aed8g0340 322 SMART tpr_5 266 299 IPR019734 GO:0005515
Aed8g0340 322 SMART tpr_5 157 190 IPR019734 GO:0005515
Aed8g0340 322 SMART tpr_5 232 265 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed8g0340 Aed-Chr8 2811998 2812966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed8g0340 - - gmx:100812214 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0060 4 398746 399819 Aed8g0340 8 2811998 2812966 PCT