Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2196 ATGGCTCCGTCACTATTTTCAAACATGCATCTCTTCTTCTTCCTCTTCTTTTTTCTCTCCACCATACAACTCTCTCTACAACTCAACCACACCACCACCACCACTAACTCAACCTCGTTCTCACTCTCTTTCTCTCTCACATCACTCTCCCTCTCCACCAACACCGCCTCCAAGATGATGCTACGCAACTCTCTCATTGCGGTCCGCAACAACACACGACTCTCATCGCCACCTTCTTCTCCTTACAACTACAAGTTGTCTTTCAAATACTCCATGGCTTTGATCGTCGACCTCCCCATTGGGACCCCACCGCAGCTTCAGCCCATGATCTTGGACACCGGAAGCCAACTCTCCTGGATTCAGTGTCACAAAAAACCACCCACCAGACCTCCCCCTACGGCGTCGTTTGACCCTTCTCTCTCCTCCACTTTCTCTATCCTCCCTTGCACTCACCCTGTCTGCAAGCCACGAATTCCCGATTTTACCCTCCCCACCTCCTGCGACCAGAACCGCCTCTGCCACTACTCCTACTTCTACGCCGACGGTACCTACGCAGAGGGAAATCTCGTCAGAGAAAAATTCACCTTCTCCCGTTCCCTTTTTACCCCTCCTTTGATACTCGGCTGCGCCACGGAATCCACCGACCCCAGGGGCATTTTGGGAATCAACCGCGGACGCCTTTCCTTCGCTTCACAGTCCAAAATCACTAAATTCTCCTACTGTGTTCCCACCCGCGACACCCGACCCGGATTCACTCCAAACGGGTCGTTCTACCTTGGCAACAACCCGAATTCCAACACTTTTCGGTACATCCAAATGTTGACTTTTGCTCAGAGTCAACGCATGCCCAATCTCGACCCCTTGGCCTATACTGTAGCCTTGCAGGGGATAAGAATCGGAGGAAGAAAACTGAACATCTCGCCTGCGGTTTTCCGTGCCGATGCTGGCGGGTCGGGTCAAACCATGGTTGACTCCGGATCCGAGTTTACTTACCTTGTTAACGAGGCTTACGATAAGGTGCGGGCTGAAGTGGTCAGGGCTGTGGGTCCCAGGATGAAGAAGGATTACGTGTACGGTGGGGTTGCGGACATGTGTTTTGATGGGAATGCGGTTGAGATCGGACGGCTGATAGGGGACATGGTCTTTGAGTTCGAGAAGGGCGTGGAAATAGTTATTCCAAAGGAGAGGGTTCTGGCTAGCGTGGAGGGTGGGGTCCACTGCGTTGGGATTGCAAGCTCTGATAAATTGGGTGCGGCCAGTAACATTATTGGAAACTTTCATCAGCAAAATGTGTGGGTGGAGTTTGATCTCGCCAATCGCAGAGTGGGTTTCGGTACAGCTGATTGTAGCAGATTGGCTAAGTAG 1365 0.5194 MAPSLFSNMHLFFFLFFFLSTIQLSLQLNHTTTTTNSTSFSLSFSLTSLSLSTNTASKMMLRNSLIAVRNNTRLSSPPSSPYNYKLSFKYSMALIVDLPIGTPPQLQPMILDTGSQLSWIQCHKKPPTRPPPTASFDPSLSSTFSILPCTHPVCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSLFTPPLILGCATESTDPRGILGINRGRLSFASQSKITKFSYCVPTRDTRPGFTPNGSFYLGNNPNSNTFRYIQMLTFAQSQRMPNLDPLAYTVALQGIRIGGRKLNISPAVFRADAGGSGQTMVDSGSEFTYLVNEAYDKVRAEVVRAVGPRMKKDYVYGGVADMCFDGNAVEIGRLIGDMVFEFEKGVEIVIPKERVLASVEGGVHCVGIASSDKLGAASNIIGNFHQQNVWVEFDLANRRVGFGTADCSRLAK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2196 454 Gene3D Acid Proteases 260 454 IPR021109 -
Aed7g2196 454 Pfam Xylanase inhibitor N-terminal 96 248 IPR032861 -
Aed7g2196 454 Gene3D Acid Proteases 79 259 IPR021109 -
Aed7g2196 454 PANTHER ASPARTYL PROTEASE-RELATED 12 454 IPR001461 GO:0004190|GO:0006508
Aed7g2196 454 CDD pepsin_A_like_plant 95 449 IPR034161 -
Aed7g2196 454 Pfam Xylanase inhibitor C-terminal 289 445 IPR032799 -
Aed7g2196 454 SUPERFAMILY Acid proteases 95 452 IPR021109 -
Aed7g2196 454 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 12 454 - -
Aed7g2196 454 ProSiteProfiles Peptidase family A1 domain profile. 94 445 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2196 Aed-Chr7 24552549 24553913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2196 71 454 Miscellaneous Gene Families AT1G77480 25.783 7.61e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2196 - - gmx:100803089 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2196 7 24552549 24553913 Aed3g2019 3 24236971 24238260 PCT