Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2179 ATGGACGAAGAGGTGCGCAAGATCTTCAGCAAGTTCGACAAGAACGGCGACGGCAAGATCTCGTGCGCTGAGCTGAAGGAGATGATGGCGGCGCTGGGATCCAAAACGACGTCGGACGAGGTGAAGCGCATGATGGCGGAGCTCGACCGAAACGGCGACGGCTACATTGACTTGAAGGAGTTCGGCGAGTTCCACTGCGGCGGAGGCGACGACGGGAGGGAGCTCCGGGAGGCCTTCGAGCTCTACGATCTAGACAAGAACGGCCTGATCTCGGCCAAGGAGCTCCACTCCGTCATGCGGAGGTTGGGGGAGAAGTGCTCCCTCAGCGACTGCCGGAGGATGATCGGAAACGTCGATGCCGACGGCGACGGCAACTGTTGCGGTTTCTTTGTCACCCTTGGTGATTTCTTCCTGCTTCATAACGTGAGGCGGTGGCAGTGTTTTCTTCACCAGCTCTACTATTTCAGTGACCTCTTCATCTGGAAAACGCTTCTCGCAATCCTCTATGATCTGTGTAATGAAAACAGGTCAACAAAAGTCATTAACCCCAAATCCCAGCGGTCAACGCCAAAGCCTTGGGTATTATATTTTGATAATATCAGAGCAAGGAATTATGCTATAATACCTATTAATTGTCAGAATTTTTTTGCTGCTTTTATGCTTAAAACCCAATACTTCAAAGCTAAAGACACAACAGAAAACACGTTGCAGACAATAAAAAAAACAATTCTAACCTGGTACTCTGACTGCGCTACTTTGGCAATAACTCTTGTTGGATCCTTCGAAGCTCCTTTGGCTCGTAAGAAATCAAGGACCTCAAAATTTGTGAGTGCACCAGCATTGGCCTCTAAGCTGTGA 858 0.4953 MDEEVRKIFSKFDKNGDGKISCAELKEMMAALGSKTTSDEVKRMMAELDRNGDGYIDLKEFGEFHCGGGDDGRELREAFELYDLDKNGLISAKELHSVMRRLGEKCSLSDCRRMIGNVDADGDGNCCGFFVTLGDFFLLHNVRRWQCFLHQLYYFSDLFIWKTLLAILYDLCNENRSTKVINPKSQRSTPKPWVLYFDNIRARNYAIIPINCQNFFAAFMLKTQYFKAKDTTENTLQTIKKTILTWYSDCATLAITLVGSFEAPLARKKSRTSKFVSAPALASKL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2179 285 ProSiteProfiles EF-hand calcium-binding domain profile. 70 105 IPR002048 GO:0005509
Aed7g2179 285 ProSitePatterns EF-hand calcium-binding domain. 13 25 IPR018247 -
Aed7g2179 285 CDD EFh 4 61 IPR002048 GO:0005509
Aed7g2179 285 ProSiteProfiles EF-hand calcium-binding domain profile. 36 64 IPR002048 GO:0005509
Aed7g2179 285 ProSiteProfiles EF-hand calcium-binding domain profile. 1 35 IPR002048 GO:0005509
Aed7g2179 285 SMART efh_1 40 68 IPR002048 GO:0005509
Aed7g2179 285 SMART efh_1 4 32 IPR002048 GO:0005509
Aed7g2179 285 SMART efh_1 74 102 IPR002048 GO:0005509
Aed7g2179 285 SUPERFAMILY EF-hand 3 125 IPR011992 -
Aed7g2179 285 ProSitePatterns EF-hand calcium-binding domain. 83 95 IPR018247 -
Aed7g2179 285 CDD EFh 74 124 IPR002048 GO:0005509
Aed7g2179 285 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 1 125 - -
Aed7g2179 285 Pfam EF-hand domain pair 3 62 IPR002048 GO:0005509
Aed7g2179 285 Pfam EF-hand domain pair 74 124 IPR002048 GO:0005509
Aed7g2179 285 Gene3D - 70 126 - -
Aed7g2179 285 Gene3D - 1 68 - -
Aed7g2179 285 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2179 Aed-Chr7 24332986 24335973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2179 4 61 EF-hand Containing Proteins AT1G66400 34.483 4.56e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2179 K13448 - gmx:100791597 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2179 7 24332986 24335973 Aed3g2047 3 24513666 24514088 PCT