Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2123 ATGAATGGCGAGGGGAGTGAAGCAATGCAAATGCAAGTGGAGAAGGAGAGGTTGGTGTACATGTGGGGTTACCTTCCCGGAGCTCTGCCGCAGAGAACGCCGCTGTTAACGCCGATTCTTGTTAGGGTTCCGCCGTCTGCTTACTCTTGGAAGGATGTTTGCGGTGGTGGTTGTGGATTTGCCATGGCTATATCTGAACCTGGAAAGCTCATAACATGGGGCTCAACAGATGATTTAGGCCAAAGCTATGTTACATCTGGCAAACATGGGGAAACTCCAGAGCCTTTCCCTCTTCCAACTGAAGTGACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACGGATTGTGGAGAAGTTTACACATGGGGATGGAGGGAATGTGTTCCCTCTGGGAAGGTGTTTGGTGAATCATTAACTGGGGTAAGCCCAGAAAAGGATGTACCAGGAAGGCAAGGTTCATTCTTGACGGAGCAAGTGAGCCCTCGTTCTCAAGGCTCAAAATCTACTGGAGGAACTGCCTCTAGTACCAGTGGAGAAGAAAGTACAAAGAGAAGAAGAGTTTCAGCAAAGCAAACAGCTGAAACCTCATCATCTAGTGAAGATAGTCTGACAGCATTGCCATGTCTTGTCACACTAAACCCAGGTGTAAGGATAGCAAGTGTTGCTGCTGGTGGTCGCCATACCTTAGCATTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGCTTGGTTTGGGTTCTAGAATACGAATGGTGTCCTCTCCTCATTTAGTTCCATGCATTAACTCCTCTCCTTATGGTAAAGATATATCGACTTCACTGGCTCGAGGAAGCATGAGTTCAGATGGGCAAAATTTCAGAGTTCCTGGAAGTTGCATAAAGGGAATTGCCTGTGGAGGTCGGCACAGTGCAGTAATCACAGATGCTGGAGCTGTGCTTATGTTTGGTTGGGGACTTTATGGACAGTGTGGTCAAGGAAGTACAGATGATGAACTGAGCCCGACTTGCGTATCTTCCTTATTGGGTATTCGAATAGAGGGAGTCGCTGCAGGACTGTGGCATACTGTGTGTACATCTGCTGATGGTGATGTATATGCATTTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAGGCTGAGACTATACCAAGGCTCTTGGATTCTCCGAGCTTGGAAAATGTGAATGTAAAGAGGATATCTTGTGGGGCTCGTCACACTGCTCTAATAACAGATAATGGAAAAGTCTTCTGCTGGGGATGGAACAAGTATGGACAGCTTGGCCTTGGGGACGTGATAGATCGTAACATTCCTTCTGAAGTTACCATCGAAGGTTGTGTAGCTAAAAACATTGCATGTGGGTGGTGGCATACTCTTCTTCTGGCCGATGTAATTAGATACTCTAGAAGTTGTTGTAAACTCGCCTGCAGCTATTTTGATTTTTACTAA 1482 0.4703 MNGEGSEAMQMQVEKERLVYMWGYLPGALPQRTPLLTPILVRVPPSAYSWKDVCGGGCGFAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQGSFLTEQVSPRSQGSKSTGGTASSTSGEESTKRRRVSAKQTAETSSSSEDSLTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSPYGKDISTSLARGSMSSDGQNFRVPGSCIKGIACGGRHSAVITDAGAVLMFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDSPSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNIACGWWHTLLLADVIRYSRSCCKLACSYFDFY 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2123 493 PRINTS Chromosome condensation regulator RCC1 signature 360 378 IPR000408 -
Aed7g2123 493 PRINTS Chromosome condensation regulator RCC1 signature 420 441 IPR000408 -
Aed7g2123 493 PRINTS Chromosome condensation regulator RCC1 signature 225 241 IPR000408 -
Aed7g2123 493 PRINTS Chromosome condensation regulator RCC1 signature 104 117 IPR000408 -
Aed7g2123 493 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 411 421 IPR000408 -
Aed7g2123 493 Pfam Regulator of chromosome condensation (RCC1) repeat 424 472 IPR000408 -
Aed7g2123 493 Pfam Regulator of chromosome condensation (RCC1) repeat 370 421 IPR000408 -
Aed7g2123 493 Pfam Regulator of chromosome condensation (RCC1) repeat 319 366 IPR000408 -
Aed7g2123 493 Gene3D - 182 476 IPR009091 -
Aed7g2123 493 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 68 120 IPR000408 -
Aed7g2123 493 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 425 475 IPR000408 -
Aed7g2123 493 MobiDBLite consensus disorder prediction 157 182 - -
Aed7g2123 493 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 12 475 - -
Aed7g2123 493 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 225 235 IPR000408 -
Aed7g2123 493 Gene3D - 12 143 IPR009091 -
Aed7g2123 493 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 239 318 IPR000408 -
Aed7g2123 493 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 12 475 - -
Aed7g2123 493 SUPERFAMILY RCC1/BLIP-II 19 474 IPR009091 -
Aed7g2123 493 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 319 370 IPR000408 -
Aed7g2123 493 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 305 315 IPR000408 -
Aed7g2123 493 MobiDBLite consensus disorder prediction 142 203 - -
Aed7g2123 493 Pfam Regulator of chromosome condensation (RCC1) repeat 222 251 - -
Aed7g2123 493 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 371 424 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2123 Aed-Chr7 23767982 23774270 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2123 - - gmx:100778841 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2123 7 23767982 23774270 Aed3g2097 3 24876121 24881209 PCT