Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2050 ATGGCCACTCACAACTACAAAGTCTTCAGCTGCTTCAACAGGAAGTTCACCGTCACCGAACCGGGCCCACCGCCGGACGTCGTAAAAGCGTTTTCTGAATTGGCCGCCGGCGCCACCTTCCTGTCCGCTGATCACCTCCTCCGGTTCCTGGCGGAGCACCAGGGCGAAGTGGACTGCACCGCAGCGGATTCCGAGCGGATCCTCCAGCAATTGCGGAAAGAGGATCATGAAACTGGATTGCATCTCCACGATTTCTTCCATTTCCTGCAACACAACGATTTCAATAGTCCCATCAAATCTCATGTACATCATGATATGAATGCTCCACTGTCACATTATTTCATCTACACTGGGCACAATTCCTATCTTACTGGGAATCAACTGAGCAGTGACTGCAGTGATGTGCCAATCATAAAGGCATTGCAACGAGGTGTGAGAGTAATTGAACTAGATTTATGGCCAAATTCAGACAAAGATGATATCGAAGTAGTTCATGGAAGGACTCTTACCACTCCTGTCTCACTCATCCAATGTTTGAAGTCCATAAAAGAGTATGCTTTTGTTAAATCTCAATACCCACTCATTATAACTTTAGAAGATCACCTTACTCCGGATCTTCAAGCTAAAGTTGCAGAGATGGCAATTAAAGTATTTGGAGAATTGCTTTATTATCCTCAGACAGATTCTATGATTGAATTCCCCTCACCAGAATCATTGAAAGGTCGAATTCTTATATCAACCAAACCACCAAAAGAATTTCTTGAATCCAAAGAATGTGATGGCAAGGACAATGAAAAGGAATTAGCTGATGAGGTTTCATCATTGCCAGACCAAACTAATGAAGCGGAAACTGATGATAAGAGTGCACCTGAGTACAAACTCTTGATTACAATACATGCTGGGAAACCGAAGGGTGGGATACTGGAGGAATTAAAAGCTGGCAGTCAAGTTAGGCGCTTAAGCTTGAGTGAACAAGCACTTGAAAAGGCTTCTGAATCTTATGGAGCTGATATTGTTAGGTTTACACAGCACAATATTCTCAGAGTATATCCAAAGGGAACACGTCTCAATTCCTCAAATTATAAGCCACACATAGGGTGGACGTATGGAGCTCAAATGGTTGCGTTTAACATGCAGGGGTTTGGCAAATCACTTCGGTACATGCAAGGAATGTTTAGAGCAAATGGAGGGTGCGGTTATGTGAAAAAGCCTGAATTTCTAATTGAAAAATGCCAAAATAATGAGGTTTTTGATCCTAAAAGAACATTGCCAGTGAAGAAAACATTAGAGGTAAAAGTCTATATGGGAACCGGTTGGAGCTTAGATTTCAGTCCAACAGACTTTGATACTTACTCGCCACCAGACTTCTACGTTAAGGTGAGCCGGGTTTGTATTGTTGGAGTTCCTGCTGATATGGTCAAGAAGAAAACAAGTGTAATTTCAAATAACTGGTTTCCCTTCTGGGACGAAGAGTTTGATTTCCCTTTGACTGTTCCAGAGCTGGCTTTGCTCCGTATAGAAGTGCGAGACGATGATAAGAGTCAAAAGGATGACTTCGGTGGACAGACTTGTTTGCCAGTCTCAGAGCTAAAATCTGGATTCCGATCAGTCCCTTTGTACGATGAAAAGGGTGACAAATTCAAATCTGTGAAGCTTCTAATGCGGTTTCAGTTTAGATGA 1680 0.428 MATHNYKVFSCFNRKFTVTEPGPPPDVVKAFSELAAGATFLSADHLLRFLAEHQGEVDCTAADSERILQQLRKEDHETGLHLHDFFHFLQHNDFNSPIKSHVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSDKDDIEVVHGRTLTTPVSLIQCLKSIKEYAFVKSQYPLIITLEDHLTPDLQAKVAEMAIKVFGELLYYPQTDSMIEFPSPESLKGRILISTKPPKEFLESKECDGKDNEKELADEVSSLPDQTNEAETDDKSAPEYKLLITIHAGKPKGGILEELKAGSQVRRLSLSEQALEKASESYGADIVRFTQHNILRVYPKGTRLNSSNYKPHIGWTYGAQMVAFNMQGFGKSLRYMQGMFRANGGCGYVKKPEFLIEKCQNNEVFDPKRTLPVKKTLEVKVYMGTGWSLDFSPTDFDTYSPPDFYVKVSRVCIVGVPADMVKKKTSVISNNWFPFWDEEFDFPLTVPELALLRIEVRDDDKSQKDDFGGQTCLPVSELKSGFRSVPLYDEKGDKFKSVKLLMRFQFR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2050 559 ProSiteProfiles C2 domain profile. 409 541 IPR000008 -
Aed7g2050 559 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 318 406 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed7g2050 559 Gene3D C2 domain 423 559 IPR035892 -
Aed7g2050 559 SUPERFAMILY PLC-like phosphodiesterases 104 409 IPR017946 GO:0006629|GO:0008081
Aed7g2050 559 Gene3D - 23 100 - -
Aed7g2050 559 Pfam C2 domain 428 533 IPR000008 -
Aed7g2050 559 MobiDBLite consensus disorder prediction 254 272 - -
Aed7g2050 559 SMART C2_3c 428 539 IPR000008 -
Aed7g2050 559 CDD C2_PLC_like 426 559 - -
Aed7g2050 559 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 421 IPR017946 GO:0006629|GO:0008081
Aed7g2050 559 CDD PI-PLCc_plant 103 395 - -
Aed7g2050 559 Pfam Phosphatidylinositol-specific phospholipase C, X domain 106 248 IPR000909 -
Aed7g2050 559 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 2 558 - -
Aed7g2050 559 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 425 558 IPR035892 -
Aed7g2050 559 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 321 407 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed7g2050 559 MobiDBLite consensus disorder prediction 254 287 - -
Aed7g2050 559 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 558 IPR001192 GO:0035556
Aed7g2050 559 SMART plcy_3 292 408 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed7g2050 559 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 104 248 - -
Aed7g2050 559 SUPERFAMILY EF-hand 5 106 IPR011992 -
Aed7g2050 559 SMART plcx_3 104 248 IPR000909 -
Aed7g2050 559 PRINTS Phospholipase C signature 135 155 IPR001192 GO:0035556
Aed7g2050 559 PRINTS Phospholipase C signature 367 385 IPR001192 GO:0035556
Aed7g2050 559 PRINTS Phospholipase C signature 109 127 IPR001192 GO:0035556
Aed7g2050 559 PRINTS Phospholipase C signature 525 535 IPR001192 GO:0035556
Aed7g2050 559 PRINTS Phospholipase C signature 346 367 IPR001192 GO:0035556
Aed7g2050 559 PRINTS Phospholipase C signature 232 249 IPR001192 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2050 Aed-Chr7 23247058 23251181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2050 2 558 Acyl Lipid Metabolism Gene Families AT2G40116 60.596 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2050 K05857 - gmx:100799027 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2050 7 23247058 23251181 Aed3g2160 3 25275514 25280292 PCT