Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2049 ATGTCGTCCAAACAGACATATAGTTTTTGCTTCTGCTTCCGGCGGCGTTTCAGGCTCCCCGTGTCGGAGGCCCCGCCGGAGATAAAGACCCTTTTCGAACGTTACTCCGATGAGAATGGCGTCATGACAGGTACTCACCTCCGCAGTTTCCTGGCCGAGGTGCAGAAGGAAGACAATGCCACTGAGGAGGAAGCACAATCCATCATCGATGGCCACAAGCATCTCAGTATCTTTCACCGAAGAGGTCTCAATCTCGAGAGTTTCTTCAACTATCTCTTCACTCACCAAAAGAACCCACCTCTCTCACCTTCTCTTGGGGTGTTCCAAGATATGTCTTTACCCTTGTCTCATTACTTCATTTATACCGGTCATAATTCCTATCTAACTGGGAACCAACTTAGCAGCGACTGCAGTGAAGTCCCCATCATCGATGCACTGAAGAAGGGTGTCAGGGTCATTGAATTAGATATATGGCCTAATGATTCAAAGGATAACGTGGATGTTCTTCATGGAAGGACTTTGACATCTCCTGTGGCACTCATCAAATGTTTGAAGGCTATTAAGCAGCATGCCTTTGTTGCCTCAGAATATCCAGTAGTAATAACCTTAGAAGATCATCTTACTCCTGACCTTCAGGCCAAAGTGGCTGAGATGATTACTCAAACATTTGGAGACATTCTATTTGCTCCTACCTCAGAAAGCTTGAAGAAATTTCCTTCTCCTGAATCACTTCAAAGGAGGATTATTATATCAACCAAGCCACCTAAGGAGTACCTTGAGGCAAAAGAAGTACAAGTAAATGAGGAGGAATCACAAAAGCCTGCAAATGATGAAGAAGCATGGGGGAAGGAAGTCCCTAGTTTGAGAGGTGGCACTATCTCTGATTACAAGAACGTTGAGGATGATGATATTCTTGATGATGAGGAAGATATCGATGAAGCAGAAAGTTCGTGTCAAAATGCAGCAGATGAATACAGGCGTTTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAACAGAATGTCTGAGAGTGGATCCTGGTAAAGTGAGACGTCTAAGTTTAAGTGAGCTACAGCTTGAAAAGGCTGCTGAAACTCATGGAAAAGAAATTGTCAGGTTTACTCAGCGAAATATACTGCGAGTGTATCCAAAAGGTACTCGCATTACCTCCACAAATTATAACCCATTGATCGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGTAGATCTCTTTGGTTGATGCAAGGAATGTTCAGTGCCAATGGTGGATGCGGTTATGTTAAAAAACCAGATTTTCTATTAGAGGGTGGTCCGAATAATGAGGTCTTTGATCCTAAAGCTCGTTTGCCTCTGAGGACAACTTTGAAGGTGACTATATATATGGGGGAAGGATGGTTTCATGATTTCAAGCATACTCACTTTGATCAATTCTCACCCCCGGACTTCTATGCAAGAGTGGGAATTGCTGGAGTCCCTTGTGATACTATTATGGAGAAAACAAAGAGTGTAGAGGATAATTGGTCACCTTCATGGAATGAAGTATTTGTGTTCCCACTTGCTATTCCAGAACTGGCTCTGCTTCGTGTAGAAGTTCATGAGTATGACATGTCTGAGAAGGATGACTTTGGTGGCCAAACGTGCTTACCTGTGTGGGAACTAAGAAATGGAATTCGAGCAGTTCCACTCTATTCCCGCAAAGGAGACAAGTATGCCAATGTGAAGCTTCTCATGCGCTTTGAATTCATTTGA 1773 0.4371 MSSKQTYSFCFCFRRRFRLPVSEAPPEIKTLFERYSDENGVMTGTHLRSFLAEVQKEDNATEEEAQSIIDGHKHLSIFHRRGLNLESFFNYLFTHQKNPPLSPSLGVFQDMSLPLSHYFIYTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNDSKDNVDVLHGRTLTSPVALIKCLKAIKQHAFVASEYPVVITLEDHLTPDLQAKVAEMITQTFGDILFAPTSESLKKFPSPESLQRRIIISTKPPKEYLEAKEVQVNEEESQKPANDEEAWGKEVPSLRGGTISDYKNVEDDDILDDEEDIDEAESSCQNAADEYRRLIAIHAGKPKGGLTECLRVDPGKVRRLSLSELQLEKAAETHGKEIVRFTQRNILRVYPKGTRITSTNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFSANGGCGYVKKPDFLLEGGPNNEVFDPKARLPLRTTLKVTIYMGEGWFHDFKHTHFDQFSPPDFYARVGIAGVPCDTIMEKTKSVEDNWSPSWNEVFVFPLAIPELALLRVEVHEYDMSEKDDFGGQTCLPVWELRNGIRAVPLYSRKGDKYANVKLLMRFEFI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2049 590 Pfam Phosphatidylinositol-specific phospholipase C, X domain 111 253 IPR000909 -
Aed7g2049 590 Gene3D C2 domain 459 590 IPR035892 -
Aed7g2049 590 MobiDBLite consensus disorder prediction 263 287 - -
Aed7g2049 590 SUPERFAMILY PLC-like phosphodiesterases 109 443 IPR017946 GO:0006629|GO:0008081
Aed7g2049 590 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 354 440 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed7g2049 590 Pfam C2 domain 462 563 IPR000008 -
Aed7g2049 590 MobiDBLite consensus disorder prediction 263 284 - -
Aed7g2049 590 Coils Coil 304 331 - -
Aed7g2049 590 Gene3D - 23 99 - -
Aed7g2049 590 SMART C2_3c 462 570 IPR000008 -
Aed7g2049 590 CDD C2_PLC_like 461 589 - -
Aed7g2049 590 SMART plcx_3 109 253 IPR000909 -
Aed7g2049 590 CDD PI-PLCc_plant 109 429 - -
Aed7g2049 590 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 109 253 - -
Aed7g2049 590 PRINTS Phospholipase C signature 401 419 IPR001192 GO:0035556
Aed7g2049 590 PRINTS Phospholipase C signature 380 401 IPR001192 GO:0035556
Aed7g2049 590 PRINTS Phospholipase C signature 556 566 IPR001192 GO:0035556
Aed7g2049 590 PRINTS Phospholipase C signature 140 160 IPR001192 GO:0035556
Aed7g2049 590 PRINTS Phospholipase C signature 114 132 IPR001192 GO:0035556
Aed7g2049 590 PRINTS Phospholipase C signature 237 254 IPR001192 GO:0035556
Aed7g2049 590 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 590 IPR001192 GO:0035556
Aed7g2049 590 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 462 589 IPR035892 -
Aed7g2049 590 Pfam Phosphoinositide-specific phospholipase C, efhand-like 27 94 IPR015359 -
Aed7g2049 590 Gene3D Phosphatidylinositol (PI) phosphodiesterase 106 455 IPR017946 GO:0006629|GO:0008081
Aed7g2049 590 SUPERFAMILY EF-hand 24 111 IPR011992 -
Aed7g2049 590 SMART plcy_3 325 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed7g2049 590 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 355 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed7g2049 590 ProSiteProfiles C2 domain profile. 442 572 IPR000008 -
Aed7g2049 590 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2049 Aed-Chr7 23240786 23245298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g2049 3 590 Acyl Lipid Metabolism Gene Families AT3G55940 67.791 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2049 K05857 - gmx:100784534 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2049 7 23240786 23245298 Aed3g2161 3 25283795 25288753 PCT