Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2161 ATGACTTCGAAACAGACATACAGCGTGTGCTTCTGCTGGCGGCGGCGGTTCAAGCTGGCGCTGGCGGAGGCGCCGTCGGAGATCAAGACCCTCTTCGAGAACTACTCCGAGAATGAGGTCATGACACCTTCGCATCTCAAAAGGTTCCTCGTCGAAGTGCAGAAGCAAGAGAAGGCCACTGAAGAAGACGCGCAAACCATCATCAATAGCTTCACTCATTTCCATCATCGCAGAGGCCTCAATCTCGAATCTTTCTTCAAGTTGCTTCTTTTGGGAAGGACAGGGCATTACAGGGAATATGAAGCCTTTTGCTTTATATTCCATTCATGGAAATACCCTTTATTGTTGGATATGCTGTATAGTGTGCACCAGGATATGACTTTACCCTTATCACACTATTTCATATATACTGGCCATAATTCCTATTTAACTGGGAATCAGCTGAGCAGCGACTGCAGTGATGTCCCCATCGTAAATGCACTGAAGAGAGGTGTGCGGGTGATTGAATTGGACATATGGCCTAATGCATCAAAGGATGATATAGATGTTCTTCATGGAAGGACATTGACCACTCCTGTGGAGCTCATCAGATGTTTGAGGTCTATTAAGGAACATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACACCAGATCTTCAGGCTAAAGTGGCTAAGATGGTTACTGAAACATTTGGAGAAGTACTATTTACTCCTAACTCAGAAAGTGTGAAGGAATTCCCTTCTCCTGAATCACTTAAAAAGAGAATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAAAGGAAAAAGGAGATGATTCACAGCACGAAAAGGAGAAAGGGGATGATTCGCAGCATAGAAAGGCATCAGGCGAAGATGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAAAGGTGGAACTATAGAGGATTACAAGGACAACAATGTGGGTGAAGATCTTAATGATTGGGAAGAATTTGATGAATCAGACAAGTCACATCATAATGAAGCTAATGAAGCTCCAGAGGCTCCAGAATATAGACGCCTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAGAGGAATGCCTCAGAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAAATCATGGACAACAAATTGTTAGGTTTACTCAGCGGAATATACTGAGGGTGTATCCAAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGGAGATCTCTTTGGTTGATGCAGGGAATGTTCAGAGCCAATGGAAGGTGTGGTTATGTTAAAAAACCAGATTTTCTTTTAGAGACTGGTCCAAATGACGACGTCTTTGATCCTAAAGCTAGGCTACATGTGAAGACTACTTTGAAGGCAAGGGTTCTATGTCGATCAGTTGCCTTTTCAAGTATCGTGGGGATTGCTGGAGTCCCTAATGATACTGTAATGAAGAGAACTAGGGCAATTGAGGATAATTGGTTACCTACATGGAATGAGGCATTTGAGTTCCCTCTTACTGTTCCCGAGTTGGCCTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGTCTACCTATCTGGGAGCTTAGAAGTGGCATTCGAGCAATTCCTCTTCATAGCCAAAAGGGAGATAAATACAACACTGTAAAGCTTCTCATGCGCTTTGAGTTTATTAATTGA 1824 0.4309 MTSKQTYSVCFCWRRRFKLALAEAPSEIKTLFENYSENEVMTPSHLKRFLVEVQKQEKATEEDAQTIINSFTHFHHRRGLNLESFFKLLLLGRTGHYREYEAFCFIFHSWKYPLLLDMLYSVHQDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIVNALKRGVRVIELDIWPNASKDDIDVLHGRTLTTPVELIRCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAKMVTETFGEVLFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSQHRKASGEDEAWGKEVPSLKGGTIEDYKDNNVGEDLNDWEEFDESDKSHHNEANEAPEAPEYRRLIAIHAGKPKGGLEECLRVDPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFRANGRCGYVKKPDFLLETGPNDDVFDPKARLHVKTTLKARVLCRSVAFSSIVGIAGVPNDTVMKRTRAIEDNWLPTWNEAFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQKGDKYNTVKLLMRFEFIN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2161 607 ProSiteProfiles C2 domain profile. 468 588 IPR000008 -
Aed3g2161 607 PRINTS Phospholipase C signature 129 147 IPR001192 GO:0035556
Aed3g2161 607 PRINTS Phospholipase C signature 572 582 IPR001192 GO:0035556
Aed3g2161 607 PRINTS Phospholipase C signature 412 433 IPR001192 GO:0035556
Aed3g2161 607 PRINTS Phospholipase C signature 155 175 IPR001192 GO:0035556
Aed3g2161 607 PRINTS Phospholipase C signature 252 269 IPR001192 GO:0035556
Aed3g2161 607 PRINTS Phospholipase C signature 433 451 IPR001192 GO:0035556
Aed3g2161 607 MobiDBLite consensus disorder prediction 271 330 - -
Aed3g2161 607 MobiDBLite consensus disorder prediction 271 310 - -
Aed3g2161 607 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 607 - -
Aed3g2161 607 SMART C2_3c 462 586 IPR000008 -
Aed3g2161 607 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 387 473 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed3g2161 607 SUPERFAMILY PLC-like phosphodiesterases 124 475 IPR017946 GO:0006629|GO:0008081
Aed3g2161 607 CDD PI-PLCc_plant 123 461 - -
Aed3g2161 607 Gene3D C2 domain 488 607 IPR035892 -
Aed3g2161 607 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 510 606 IPR035892 -
Aed3g2161 607 Gene3D Phosphatidylinositol (PI) phosphodiesterase 120 487 IPR017946 GO:0006629|GO:0008081
Aed3g2161 607 Pfam Phosphatidylinositol-specific phospholipase C, X domain 126 268 IPR000909 -
Aed3g2161 607 Pfam C2 domain 517 579 IPR000008 -
Aed3g2161 607 SMART plcx_3 124 268 IPR000909 -
Aed3g2161 607 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 386 472 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed3g2161 607 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 607 IPR001192 GO:0035556
Aed3g2161 607 SMART plcy_3 357 474 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Aed3g2161 607 Gene3D - 22 94 - -
Aed3g2161 607 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 71 IPR015359 -
Aed3g2161 607 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 124 268 - -
Aed3g2161 607 SUPERFAMILY EF-hand 17 90 IPR011992 -
Aed3g2161 607 CDD C2_PLC_like 492 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2161 Aed-Chr3 25283795 25288753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2161 3 606 Acyl Lipid Metabolism Gene Families AT3G08510 63.967 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2161 K05857 - gmx:547864 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2161 3 25283795 25288753 Aed3g2161 3 25283795 25288753 ECH
Aed7g2049 7 23240786 23245298 Aed3g2161 3 25283795 25288753 PCT