Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2040 ATGGCGGCTGCCAACGCTCCGATCACCATGAGAGAAGCTCTCACTTTGCCGAGCATTGGCATAAATTCGCAGTTCATCACGTTCACGCATGTGACGATGGAGTCCGATAAGTATATATGCGTTCGAGAAACGGCTCCGCAGAATAGCGTGGTTATCATTGATATGAACATGCCGAATCAGCCTTTGAGGAGGCCTATTACGGCAGATTCCGCTCTCATGAATCCGAATTCCAGAATCCTTGCTTTGAAAGCTCAACTCCAAGGAACAACTCAAGACCACCTCCAAATTTTTAACATTGAAATGAAAGCAAAGATGAAATCTTACCAGATGCCTGAGCAGGTGGTCTTTTGGAAGTGGATTACGCCCAAGTTGTTGGGTCTTGTGACACAGACCTCTGTATACCATTGGTCAATAGAAGGTGATTCTGAACCTGTAAAGATGTTTGAGAGAACAGCAAATTTGGCAAACAATCAAATAATTAATTATCGATGTGATCCTTCTGAAAAATGGTTGGTCTTGATTGGTATTGCTCCAGGTTCCTCCGAGAGGCCACAATTGGTTAAAGGAAATATGCAACTCTTCTCTGTGGATCAACAGCGCAGCCAGGCTCTTGAAGCGCATGCTGCATCATTTGCTCAATTTAAAGTTCCTGGGAATGAAAATCCTTCTACTTTGATTTCTTTTGCCTCTAAGACACTTAATGCTGGTCAAATTATATCCAAGTTGCATGTTATTGAGCTGGGTGCACAGCCAGGGAAGCCATCGTTTACAAAGAAACAAGCAGATCTTTTCTTTCCCCCAGATTTTGCTGATGATTTTCCCGTTGCTATGCAGATATCCCACAAATACAGTTTGATTTACGTGATTACGAAACTTGGTCTCTTATTTGTATATGATTTGGAGACAGCTACAGCCGTATATAGGAACAGAATTAGTCCTGATCCTATCTTTTTGACATCAGAAGCTACATCAGTGGGAGGCTTTTATGCCATTAACAGGAGGGGCCAGGTGTTATTGGCTACTGTTAATGAGCAAACGATTGTGAATTTTGTCAGTGGTCAATTAAACAATTTGGAGCTAGCAGTTAATCTTGCCAAGCGAGGAAATCTTCCTGGTGCTGAGAAACTGAGTGTTCCTGTGCAAACTGGGCAAACTCCTCCACTATTGCAGTATTTTGGAACACTTCTAACGAGAGGAAAGCTAAATGCCTTTGAGTCGTTAGAATTGTCACGGCTGGTTGTGAACCAGAACAAGAAAAATCTTTTGGAGAATTGGTTGGCAGAGGACAAGCTTGAATGCAGTGAGGAGTTAGGAGACCTTGTAAAGGTTGGGTACACGCCTGACTATCTCTTCCTTTTGCAAACAATTCTCCGGGCAGATCCTCAGGGTGCTGTTAATTTTGCATTAATGATGTCGCAAATGGAGGGAGGCTGCCCAGTTGATTACAACACCATAACTGATCTGTTTCTTCAGAGAAATCTGATCCGTGAGGCAACAGCTTTTCTCCTAGATGTTCTGAAACCAAATCTACCGGAACATGGGTTCCTTCAAACAAAGGTGTTGGAGATAAATCTGGTTACTTTCCCAAATGTTGCTGATGCAATTTTGGCTAATGGCATGTTCAGCCATTATGACCGTCCTCGTATTGCCCAACTTTGTGAAAAAGCTGGTCTTTATGTGCGATCTTTGCAAGATCCTGACATTCACTTTAAGTACATTGAGGCAGCAGCAAAGACTGGACAAATCAAAGAGGTTGAGCGTGTGACTAGAGAATCAAGTTTCTATGATCCTGAGAAAACAAAGAACTTTCTAATGGAAGCTAAGCTTCCAGATGCACGACCTCTGATTAATGTTTGTGACCGATTTGGTTTTGTTCCGGATCTAACACACTATCTATACACAAACAAAATGCTTCGTTATATTGAAGGTTATGTTCAGAAGGTGAACCCAGGGAATGCTCCTTTAGTTGTTGGGCAGCTTTTAGATGATGAGTGTCCAGAAGATTTTATCAAAGGCTTGATTCTCTCTGTTCGTTCATTACTGCCAGTGGAACCCCTTGTGGAGGAGTGTGAGAAGAGGAATCGGCTTCGTTTGCTCACACAGTTTTTGGAACATCTTAATTCTGCATTCAGTGGGAACTTTAATCTGCAGAATCTGCTTATTTTAACAGCAATAAAGGCTGATCCATCCAGAGTTATGGATTATGTTAATAGACTGGATAATTTTGATGGGCCTGCAGTTGGAGAAATGGCTGTTGAGGCTCAATTATATGAGGAAGCATTCGCAATTTTCAAGAAGTTCAATTTAAATGTCCAAGCAGTCAATGTCTTGCTAGATAATATTCATAGCATTGACAGGGCTGTGGAGTTTGCTTTCCGAGTTGAAGAAGATGATGTTTGGAGTCAAGTTGCCAAGGCTCAACTAAGGGAAGGGCTAGTAAGTGATGCCATTGAGTCCTTTATACGAGCAGACGATGCCACACAATTTTTAGATGTTATCCGTGCTGCTGAAAACACTGATGTTTACCATGACTTGGTGAAATACTTGCTGATGGTAAGGCAGAAAACAAAAGAACCCAAGGTGGATAGTGAGCTCATTTATGCATATGCAAAGATTGATAGGCTCAGTGACATTGAGGAGTTCATTCTTATGCCGAATGTAGCCAATCTTCAAAATGTTGGTGACCGATTGTATGATGAAGAGCTATATGAAGCTGCCAAAATCATATTTGCCTTTATATCTAACTGGGCCAAGTTAGCAGTTACACTTGTGAAGTTGAAACAGTTCCAAGGTGCAGTTGATGCAGCGAGAAAAGCTAACAGTGCAAAAACGTGGAAGGAAGTTTGTTTTGCGTGCGTTGACGCAGAGGAGTTCCGTTTGGCCCAGATTTGTGGGCTTAACATTATTATTCAGGTGGATGACTTGGAAGAGGTCAGTGAATATTACCAAAATAGAGGTTGCTTCAATGAGCTAATATCCCTCATGGAGAGTGGTTTAGGATTAGAACGGGCACATATGGGTATCTTCACCGAGTTAGGAGTTCTATATGCTAGATATCGTCCTGAGAAGCTTATGGAGCATATCAAACTATTTGCGACCCGACTCAATATTCCAAAACTCATAAGAGCTTGTGATGAACAACAACATTGGAAGGAGCTGACCTATTTGTACATCCAATATGATGAGTTCGATAATGCGGCAACAACCATCATGAACCATTCACCTGAAGCATGGGATCACATGCAGTTCAAAGATGTTGTTGTCAAAGTTGCTAATGTGGAGTTGTATTACAAGGCTGTTCACTTCTATTTACAAGAGCATCCAGATCTTATCAATGATGTTCTGAATGTCCTTGCACTTCGTGTTGATCATGCACGTGTTGTTGACATCATGCGAAAGGCTGGTCATCTCCGTCTTGTCAAGCCATACATGGTTGCAGTTCAGAGTAACAATGTGTCTGCTGTTAATGAAGCCCTGAATGAAATTTATGTTGAGGAGGAAGACTATGATAGATTGCGCGAGTCAATTGATTTCCATGACAACTTTGACCAAATAGGCCTTGCACAGAAGATTGAAAAGCATGAGCTTCTTGAGATGAGACGTGTCGCTGCTTATATTTACAAGAAGGCAGGTAGATGGAAGCAGTCCATTGCCTTGTCAAAGAAGGATAACCTTTACAAAGATGCCATGGAGACAGCCTCACAATCTGGTGAACGTGAACTTGCTGAGGAGCTGCTTGTTTATTTCATTGATAAGGGAAAGAAAGAATGCTTTGCCTCGTGTCTATTTGTTTGCTATGATTTGATCCGGGCAGACATTGCTCTTGAGTTGGCCTGGATGAACAATATGATCGACTTTGCCTTCCCATATCTCTTGCAGTTTATCCGTGAGTACACTGGGAAAGTTGATGAACTGGTGAAGGACAAAATTGAAGTGCAGAACCAAGTGAAGGCTAAAGAGCAAGAAGAGAAAGAAGTAATTTCGCAACAGAATATGTATGCTCAGTTGTTGCCTCTTGCTTTGCCTGCACCACCAATGCCTGGAATGGGAGGAGGCTTTGCCCCTCCGCCTCCAATGGGTGGATTGGGGATGCCTCCAATGCCTCCTTTTGGTATGCCACCCATGGGCAGCTACTGA 4137 0.4235 MAAANAPITMREALTLPSIGINSQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQPLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWITPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPSEKWLVLIGIAPGSSERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSTLISFASKTLNAGQIISKLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDLETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLELAVNLAKRGNLPGAEKLSVPVQTGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKVGYTPDYLFLLQTILRADPQGAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRSLQDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNKMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEMAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDDVWSQVAKAQLREGLVSDAIESFIRADDATQFLDVIRAAENTDVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLSDIEEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNVLALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDFHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGERELAEELLVYFIDKGKKECFASCLFVCYDLIRADIALELAWMNNMIDFAFPYLLQFIREYTGKVDELVKDKIEVQNQVKAKEQEEKEVISQQNMYAQLLPLALPAPPMPGMGGGFAPPPPMGGLGMPPMPPFGMPPMGSY 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2040 1378 Coils Coil 1155 1175 - -
Aed7g2040 1378 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 674 816 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 PIRSF CHC 705 1352 IPR016341 GO:0016192|GO:0032051|GO:0071439
Aed7g2040 1378 PIRSF CHC 441 565 IPR016341 GO:0016192|GO:0032051|GO:0071439
Aed7g2040 1378 PIRSF CHC 560 707 IPR016341 GO:0016192|GO:0032051|GO:0071439
Aed7g2040 1378 PIRSF CHC 3 380 IPR016341 GO:0016192|GO:0032051|GO:0071439
Aed7g2040 1378 PIRSF CHC 375 443 IPR016341 GO:0016192|GO:0032051|GO:0071439
Aed7g2040 1378 Coils Coil 1295 1322 - -
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN 377 443 - -
Aed7g2040 1378 Gene3D - 377 461 IPR012331 -
Aed7g2040 1378 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1115 1258 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 Gene3D - 1220 1316 - -
Aed7g2040 1378 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 473 669 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN 442 564 - -
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN 707 1376 - -
Aed7g2040 1378 Gene3D - 1 376 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Aed7g2040 1378 SUPERFAMILY Clathrin heavy-chain terminal domain 5 343 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN 562 708 - -
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN RELATED 442 564 - -
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN RELATED 1 378 - -
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN 1 378 - -
Aed7g2040 1378 SUPERFAMILY ARM repeat 418 620 IPR016024 -
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN RELATED 377 443 - -
Aed7g2040 1378 SUPERFAMILY ARM repeat 627 745 IPR016024 -
Aed7g2040 1378 Pfam Region in Clathrin and VPS 1118 1257 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 Pfam Region in Clathrin and VPS 824 959 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 Pfam Region in Clathrin and VPS 970 1109 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 Pfam Region in Clathrin and VPS 677 809 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 Pfam Region in Clathrin and VPS 479 561 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 Pfam Region in Clathrin and VPS 564 667 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN RELATED 562 708 - -
Aed7g2040 1378 PANTHER CLATHRIN HEAVY CHAIN RELATED 707 1376 - -
Aed7g2040 1378 Gene3D Tetratricopeptide repeat domain 875 1214 IPR011990 GO:0005515
Aed7g2040 1378 Gene3D Tetratricopeptide repeat domain 729 874 IPR011990 GO:0005515
Aed7g2040 1378 SMART CLH_2 966 1112 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 SMART CLH_2 1115 1274 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 SMART CLH_2 820 961 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 SMART CLH_2 534 669 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 SMART CLH_2 674 816 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 SUPERFAMILY ARM repeat 730 873 IPR016024 -
Aed7g2040 1378 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 820 961 IPR000547 GO:0006886|GO:0016192
Aed7g2040 1378 Pfam Clathrin, heavy-chain linker 344 367 IPR015348 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Aed7g2040 1378 Pfam Clathrin propeller repeat 154 197 IPR022365 -
Aed7g2040 1378 Pfam Clathrin propeller repeat 20 56 IPR022365 -
Aed7g2040 1378 SUPERFAMILY ARM repeat 345 442 IPR016024 -
Aed7g2040 1378 SUPERFAMILY ARM repeat 874 1209 IPR016024 -
Aed7g2040 1378 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 966 1112 IPR000547 GO:0006886|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2040 Aed-Chr7 23143948 23156129 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2040 K04646 - zju:107413874 1795.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2040 7 23143948 23156129 Aed3g2171 3 25386787 25401232 PCT