Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2017 ATGGAGTCTGTCAAGTCCATTGATCACAACAACTCCATCTTCTTGGCCATCTTTGTTCTCTTATTAGCTTCAGCAAATGCCGCCAAAACTCACAAGCACGAGTTTGTCGTTGAAGCAAGTCCAGTGAAGAGGCTGTGCAAAACCCACAACAGCATCATCGTGAATGGGCAATACCCTGGGCCAACGTTGGAAATCAGCAACGGAGACACTTTGGTCGTCAAAGTCACTAACAAAGCTCGTTACAATGTCACCATTCATTGGCACGGTGTTAGGCAAATGAGAACAGGATGGGCAGATGGACCAGAATTTGTGACACAGTGTCCGATTCGTCCTGGAGGAAGTTACACCTACCGTTTTACCGTTGAAGGACAAGAAGGAACACTTTGGTGGCACGCTCATAGCTCATGGTTAAGGGCCACCGTTTATGGTGCTTTAATAATTCGTCCTAGGGAAGGAGAAACCTACCCTTTCCACAAGCCAATAAACCACGACAACACACCCATTCTTCTTGGGGAATGGTGGGACGCCAACCCTATTGATGTTGTGAGGCAAGCCACACGAACTGGGGGAGCTCCTAACGTCTCTGATGCTTACACTATCAATGGTCAACCTGGTGATTTTTATAACTGCTCTACCAAAGACACTACCATAGTCCCAATCCATTCCGGCGAGACCAAGCTTCTCCGTGTGATCAATGCTGCACTGAATCAACCTCTGTTCTTCACCGTCGCAAACCACAAACTCACGGTGGTTGGCGCCGACGCGTCCTACCTGAAGCCCTTCACCACCAAAGTCCTCATGCTCGGCCCCGGTCAAACCACCGACGTCCTCATCACCGGCGACCAGGCACCTTCACGCTACTACATGGCGGCGCGTGCGTACCAATCCGCCCAAAACGCCGCCTTCGACAACACCACCACCACCGCCATACTCGAATACAAATCACCCGGTCACCATAACAACACTAAGCACTCTCACCACCATTCCAAAGGAGTGAATAAGAACAAAACCAAACCGATAATGCCCTCACTCCCTGCTTACAACGACACAAACACCGTCACTGCCTTCAGCAAAAGCTTCCGAAGCCCTAGAAAAGTTGAAGTCCCAACCGAAATAGACCAGAGCCTCTTCTTCACTGTGGGCTTAGGAATCAAAAAGTGCCCCAAGAACTTCGGACCAAAGAGGTGTCAGGGACCCATTAACGGCACACGTTTCACCGCGAGCATGAACAACGTCTCTTTCGTTCTCCCGAACAACGTGTCGATCTTGCAGGCTCACTACCTCGGAATCCCCGGAGTGATCAGCACCGATTTTCCGGTGAAGCCTCCGGTGAAGTTTGATTACACCGGCAACGTGAGTCGTTCGCTGTGGCAACCCACTCCCGGGACAAAGGCGCACAAGTTGAAGTTTGGGTCTAGGGTGCAGATTGTGTTGCAGGATACTAGCATTGTTACTTCTGAGAACCACCCTATTCATCTCCATGGCTATGATTTCTACATCGTCGCAGAAGGGTTCGGGAACTTTGACCCCAAGAAAGATACCGCGAAATTCAACCTTGTTGATCCACCTCTCAGGAACACAGTGGCAGTGCCTGTTAATGGATGGGCAGTTATTCGCTTTGTCGCTGATAATCCAGGTGCTTGGCTTATGCATTGTCACTTGGACGTTCACATCGGATGGGGTTTGGCTACGGTGTTGTTGGTGGAAAACGGAGTTGGGAAGTTGCAATCGATAGAGCCTCCTCCGCTGGATCTCCCTCTTTGTTAA 1767 0.5025 MESVKSIDHNNSIFLAIFVLLLASANAAKTHKHEFVVEASPVKRLCKTHNSIIVNGQYPGPTLEISNGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVEGQEGTLWWHAHSSWLRATVYGALIIRPREGETYPFHKPINHDNTPILLGEWWDANPIDVVRQATRTGGAPNVSDAYTINGQPGDFYNCSTKDTTIVPIHSGETKLLRVINAALNQPLFFTVANHKLTVVGADASYLKPFTTKVLMLGPGQTTDVLITGDQAPSRYYMAARAYQSAQNAAFDNTTTTAILEYKSPGHHNNTKHSHHHSKGVNKNKTKPIMPSLPAYNDTNTVTAFSKSFRSPRKVEVPTEIDQSLFFTVGLGIKKCPKNFGPKRCQGPINGTRFTASMNNVSFVLPNNVSILQAHYLGIPGVISTDFPVKPPVKFDYTGNVSRSLWQPTPGTKAHKLKFGSRVQIVLQDTSIVTSENHPIHLHGYDFYIVAEGFGNFDPKKDTAKFNLVDPPLRNTVAVPVNGWAVIRFVADNPGAWLMHCHLDVHIGWGLATVLLVENGVGKLQSIEPPPLDLPLC 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2017 588 CDD CuRO_3_LCC_plant 433 571 IPR034289 GO:0005507
Aed7g2017 588 TIGRFAM laccase: laccase 28 588 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aed7g2017 588 Gene3D - 17 149 IPR008972 -
Aed7g2017 588 Gene3D - 395 588 IPR008972 -
Aed7g2017 588 Gene3D - 162 365 IPR008972 -
Aed7g2017 588 CDD CuRO_2_LCC_plant 167 313 IPR034285 -
Aed7g2017 588 PANTHER MULTI-COPPER OXIDASE 10 588 IPR045087 -
Aed7g2017 588 MobiDBLite consensus disorder prediction 320 334 - -
Aed7g2017 588 Pfam Multicopper oxidase 438 570 IPR011706 GO:0005507|GO:0016491
Aed7g2017 588 SUPERFAMILY Cupredoxins 165 363 IPR008972 -
Aed7g2017 588 CDD CuRO_1_LCC_plant 33 149 IPR034288 GO:0005507
Aed7g2017 588 ProSitePatterns Multicopper oxidases signature 2. 551 562 IPR002355 GO:0005507
Aed7g2017 588 MobiDBLite consensus disorder prediction 316 344 - -
Aed7g2017 588 Pfam Multicopper oxidase 165 314 IPR001117 -
Aed7g2017 588 Pfam Multicopper oxidase 37 151 IPR011707 GO:0005507
Aed7g2017 588 SUPERFAMILY Cupredoxins 368 588 IPR008972 -
Aed7g2017 588 SUPERFAMILY Cupredoxins 27 162 IPR008972 -
Aed7g2017 588 ProSitePatterns Multicopper oxidases signature 1. 546 566 IPR033138 -
Aed7g2017 588 PANTHER LACCASE 10 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2017 Aed-Chr7 22968726 22971595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2017 K05909 - gmx:100808948 1100.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2017 7 22968726 22971595 Aed3g2197 3 25556131 25559469 PCT