Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2005 ATGGCCGATCAGTTCTCGAAGGGAGAAGAATTCGAGAAGAAGGCTGAGAAGAAGCTCAACGGTTGGGCCTTGTTTGGCTCCAAGTACGATGATGCCGCCGATCTCTTCGAAAAAGCCGCCAATTCCTTCAAGCTCGCCAAATCATGGGACAAGGCGGGAGCGGCATACCTGAAGTTGGCAAGTTGTCATTTGAAGTTGGAAAGCAAGCATGAAGCTGCACAGGCCAATGTTGATGCTGCACATTGCTATAAAAAATCTAATATTAACGAGTCCGTATCTTGCTTAGATCGTGCTGTAAATCTTTTCTGTGACATTGGAAGACTCTCTATGGCCGCTAGATATTTAAAGGAAATTGCTGAATTGTATGAAGGTGAACAAAATATTGAGCAGGCTCTTAAGTCGATTGAGATTTATGAAGAGATAGCTCGCCAATCCCTCAACAATAATATGCTGAAGTATGGAGTTAAAGGGCACCTTCTTAATGCTGGCATCTGCCAACTCTGTAAAGCAGATGTTATTGCTATAACCAATGCATTAGAACGATATCAGGAATTAGATCCACTATTTTCAGGAACACGTGAATATAGATTATTGGCGGATATCGCTGCTGCAATTGATGAGGAAGATGTTGTGAAGTTTACTGATGTTGTCAAGGAATTTGATAGCATGACCCCTCTGGATTCTTTCAAGACCACACTTCTTTTAAGGGTGAAGGAAAAGCTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTGA 759 0.4216 MADQFSKGEEFEKKAEKKLNGWALFGSKYDDAADLFEKAANSFKLAKSWDKAGAAYLKLASCHLKLESKHEAAQANVDAAHCYKKSNINESVSCLDRAVNLFCDIGRLSMAARYLKEIAELYEGEQNIEQALKSIEIYEEIARQSLNNNMLKYGVKGHLLNAGICQLCKADVIAITNALERYQELDPLFSGTREYRLLADIAAAIDEEDVVKFTDVVKEFDSMTPLDSFKTTLLLRVKEKLKAKELEEDDLT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2005 252 PANTHER ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 133 252 - -
Aed7g2005 252 SUPERFAMILY TPR-like 5 243 IPR011990 GO:0005515
Aed7g2005 252 CDD SNAP 25 241 IPR000744 GO:0006886
Aed7g2005 252 PANTHER ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 1 132 - -
Aed7g2005 252 Gene3D Tetratricopeptide repeat domain 6 130 IPR011990 GO:0005515
Aed7g2005 252 Gene3D Tetratricopeptide repeat domain 131 251 IPR011990 GO:0005515
Aed7g2005 252 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Aed7g2005 252 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Aed7g2005 252 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 133 252 IPR000744 GO:0006886
Aed7g2005 252 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 132 IPR000744 GO:0006886
Aed7g2005 252 Pfam Soluble NSF attachment protein, SNAP 7 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2005 Aed-Chr7 22882751 22886752 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2005 K15296 - gmx:100814639 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2005 7 22882751 22886752 Aed3g2209 3 25608941 25611957 PCT