Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g2000 ATGGAGTCAGTTCAGTCTTGGGTTTCAAAGCACAAGCTCGCCAGCATTGGAGCACTCTGGGCCTCTGGAATTGGAGCAACACTTGTGGCTTATTCATGCAAAGAGTCTCCAATGAAGCCAAGTCTCAGGCTTATTCATGCTAGGATGCATGCTCAGGCTCTAACTTTAGCAGTGCTATCGGGTGCAGCTGCTTATCATTATTATGAGAAACGTGATGTTCGACCAAAACCAGTGGCAGAATCAGATTATATTCCTGCTCCCAATGTCACCCTGCAGATGGTTGAATATCACTGTCCTTTCTAA 303 0.4587 MESVQSWVSKHKLASIGALWASGIGATLVAYSCKESPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYEKRDVRPKPVAESDYIPAPNVTLQMVEYHCPF 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g2000 100 Gene3D - 13 72 - -
Aed7g2000 100 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
Aed7g2000 100 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
Aed7g2000 100 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 77 IPR040153 -
Aed7g2000 100 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 4 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g2000 Aed-Chr7 22859842 22860356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g2000 - - gmx:100500345 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2000 7 22859842 22860356 Aed3g2216 3 25645177 25645561 PCT