Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2216 ATGGACGCAATTCAATTGTGGATTTCAAAGCACAAGCTAGTGACAGTTGGGGGAGTGTGGGCCTCTGGAATAGGGGCATCGCTGGTGGCTTATTCGCATACAACCTCTCCAATGAAGCCTAGTCTTAGACTTATCCATGCCAGATTGCATGCCCAAGCGCTAACACTGGCAGTGTTGTCTGGTGCCGCGGCTTATCGCTACTACGAGAATCGCGCTGCTAATTAA 225 0.5022 MDAIQLWISKHKLVTVGGVWASGIGASLVAYSHTTSPMKPSLRLIHARLHAQALTLAVLSGAAAYRYYENRAAN 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2216 74 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
Aed3g2216 74 Gene3D - 13 72 - -
Aed3g2216 74 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 71 - -
Aed3g2216 74 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 3 71 IPR040153 -
Aed3g2216 74 ProSiteProfiles HIG1 domain profile. 1 74 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2216 Aed-Chr3 25645177 25645561 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2216 - - aip:107608949 104.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2216 3 25645177 25645561 Aed3g2216 3 25645177 25645561 ECH
Aed7g2000 7 22859842 22860356 Aed3g2216 3 25645177 25645561 PCT