Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1922 ATGATGAAGTGTTTCTCCTTATCCTCAATCTCTCTTTTTATTCTCCTTTTTCTCTGTTCCGAGAGCGTGTCCTCTCAAAATGTATCCGAGAGTGACCAGCAGCAAGCTAGCATTCCACCAAGAGGTTGGAACTCCTATGACTCTTTTTGCTGGACAATTTCTGAAGAAGAATTCCTACAGAGTGCCAAAATAGTTTCTCAGCGTCTCCATGATCATGGATACGAGTATGTTGTGGTGGATTACCTCTGGTATAGAAGGAAAGTAGAGGGTGCTTATCACGATTCTCTCGGATTTGATGTGATCGATGAGTGGGGGAGGATGGTTCCTGACCCAGGAAGGTGGCCTTCTTCTGAAAATGGGAAAGGATTCACTGAAGTAGCTAATCAAGTGCATAGCGTGGGTCTAAAATTTGGGATTCATGTCATGAGAGGGATAAGCACACAAGCCGTCAATGCAAACACCCCTATCCTTGATATGACAATGGGAGGTGCTTATCAAGAATCTGGACGAGTGTGGTATGCAAAAGACATAGCAATCCCAGAAAGGGCTTGTGCATGGATGTCCCATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCTGGGAAAGCTTTTTTGAGATCCCTTTATGAGCAGTATGCTGCATGGGGTGTTGATTTAGTGAAACATGACTGTGTATTCGGGGAAGACTTGGATTTAAATGAAATAAGCTACGTGTCTGAGGTTCTCAAGGAGTTTAATCGCCCCATTGTGTATTCTTTGTCTCCTGGAACCAGTGTGACACCAGTCATGGCCAAGGATGTCAGTGGACTGGTCAATATGTATCGTATAACAGGAGATGACTGGGATACATGGGGGGATGTCAAAGCTCATTTTGACATAACAAGGGATTTTTCAAATGCTAATATGTTAGGAGCAAAAGGTTTACTGGGGAACTCTTGGCCTGATTTGGACATGCTACCATTTGGATGGCTAACTGATCCAGGTTCAAATGAAGGTCCACATAGGTATAGTAACCTCAATCTAGAAGAGAAGAAGACACAGATGATTCTGTGGTCTATGGGAAAGTCTCCCCTTATGTATGGAGGGGATGTTCGGAAGATTGATCCTAGCACATATGATGTTATCACAAATCCTACCCTTTTGGAGATTAATTCTTTTAGCTCAAATAACATGGAGGCATGTGAGCCATCTGACTTTTTTCGGTTTCCTTATATCACAAGTGTGCACAGTGAAGATCGGGATCTTGGTGTGCAAAAGAGAAGAAGCAGCAAAGAAATGAAAACAACCTATACTCATTCATTAGGTCTCACAAGCTGCACTGAGTCAAAGGCAAGTGGTTGGGCCAGTGAAAGGCTTAACCAATATCTTGAAAGAATATGTTGGAAAAGGAGTTTAGGAAACAAGCATCTTGCCCCCTTCTGTGTGCACAAGAGAGAACTTTACTACCCATTTGATGAAGTGAGTATGTATCAAGAGTATCATCAAAGGAAATATCATTTAGTTGCAACCAACAGAATAAAATTTTGCTTGGATGCTTCTCCAAGACGCAAGCTTACTTCTAAAGAACTCAAGAGAGGGACATTTTCTCCCTGCAGGTGGGATTCAAATCAGATGTGGGAGTTGAGCCCTAATGGGACCCTGGTGAATAGTTATTCTGGTTTGTGTGCAACAGTAGAGTCTAGCAAAGATACTATTAATTCTGGTGGTTTGCGCTCTTGGATTGCTACAGGAAGAAAAGGAGAAGTGTATGTTGCTTTCTTCAATCTAAGTGAACAGAACACTGTAATGTCTGCACAAACATCAGACCTGGCTAAGGTTCTTCCTGGCAGAGACTTCAGTTCTTGTCAGGGCAGTGAAGTGTGGAGTGGAGATGCTATAGAAATAACTCAGGGGACGTTATCAAAATCAGTGGAAGTGCATGGAAGTGCACTAATTGTTCTGAATTGCAACTAG 1953 0.425 MMKCFSLSSISLFILLFLCSESVSSQNVSESDQQQASIPPRGWNSYDSFCWTISEEEFLQSAKIVSQRLHDHGYEYVVVDYLWYRRKVEGAYHDSLGFDVIDEWGRMVPDPGRWPSSENGKGFTEVANQVHSVGLKFGIHVMRGISTQAVNANTPILDMTMGGAYQESGRVWYAKDIAIPERACAWMSHGFMSVNTKLGAGKAFLRSLYEQYAAWGVDLVKHDCVFGEDLDLNEISYVSEVLKEFNRPIVYSLSPGTSVTPVMAKDVSGLVNMYRITGDDWDTWGDVKAHFDITRDFSNANMLGAKGLLGNSWPDLDMLPFGWLTDPGSNEGPHRYSNLNLEEKKTQMILWSMGKSPLMYGGDVRKIDPSTYDVITNPTLLEINSFSSNNMEACEPSDFFRFPYITSVHSEDRDLGVQKRRSSKEMKTTYTHSLGLTSCTESKASGWASERLNQYLERICWKRSLGNKHLAPFCVHKRELYYPFDEVSMYQEYHQRKYHLVATNRIKFCLDASPRRKLTSKELKRGTFSPCRWDSNQMWELSPNGTLVNSYSGLCATVESSKDTINSGGLRSWIATGRKGEVYVAFFNLSEQNTVMSAQTSDLAKVLPGRDFSSCQGSEVWSGDAIEITQGTLSKSVEVHGSALIVLNCN 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1922 650 Pfam Alpha galactosidase A 209 384 IPR002241 GO:0004553|GO:0005975
Aed7g1922 650 Pfam Alpha galactosidase A 52 147 IPR002241 GO:0004553|GO:0005975
Aed7g1922 650 Gene3D - 561 649 IPR013780 -
Aed7g1922 650 Pfam Alpha galactosidase C-terminal beta sandwich domain 568 647 IPR041233 -
Aed7g1922 650 Gene3D Aldolase class I 29 387 IPR013785 -
Aed7g1922 650 SUPERFAMILY (Trans)glycosidases 35 384 IPR017853 -
Aed7g1922 650 CDD GH27 39 384 IPR002241 GO:0004553|GO:0005975
Aed7g1922 650 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 4 647 IPR002241 GO:0004553|GO:0005975
Aed7g1922 650 SUPERFAMILY Glycosyl hydrolase domain 565 647 - -
Aed7g1922 650 PRINTS Glycosyl hydrolase family 27 signature 33 52 IPR002241 GO:0004553|GO:0005975
Aed7g1922 650 PRINTS Glycosyl hydrolase family 27 signature 127 148 IPR002241 GO:0004553|GO:0005975
Aed7g1922 650 PRINTS Glycosyl hydrolase family 27 signature 342 363 IPR002241 GO:0004553|GO:0005975
Aed7g1922 650 SUPERFAMILY Ricin B-like lectins 507 574 IPR035992 -
Aed7g1922 650 PANTHER ALPHA-GALACTOSIDASE 4 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1922 Aed-Chr7 22284945 22291117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1922 3 479 Glycoside Hydrolase AT3G26380 66.109 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1922 - - gmx:100777954 1226.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1922 7 22284945 22291117 Aed7g1922 7 22284945 22291117 ECH
Aed5g1945 5 22437192 22441988 Aed7g1922 7 22284945 22291117 PCT