Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1912 ATGCAACATGATATTCTTATAAAGAAGCTCCTCCTTACACACGATCCAGATGGTCGCAGGCTGGATTCTGAAACAATGCTTCTTGCTGTGGGCAACATAATGTTTCATGCTTCCACAATAATTGGGGCTTTTAATTTGTATTCTGCTTCCTTTCAGAAGAATGATATAACTGAAATTGAAACGATTGGTTGTAGTGAACCAGTAGGATTCATCATCACAAAACTATGCAAGATACTCTGCAAATGCTCTGGTGAGAGTGGTGATGTTAACTCAAGGATCATAAACTTGTTTGATTTGATAGGGAAGTATAGTTGGGATGCAAAAGTAGTTTTAGTGCTTGCCGCTTTTGCTGTAAGATATGGTGAATTCTGGCAACTTAAGCAGCTATATCACGGTAACACTTTGGCAGCATTGATTTCAAGCATTAAGCAGCTACCATACAACTTAAAGCCGCTGAAGCTACAAATCAAGGCATTGAGCTTGTTGGTTAAGACCATGATGGATGTGGCTATGTGTATCATCAAGTACTCAGATTCAACAATAATTGCTTCTTGGGAGCTTTCAAGCTTGGCGTATAGATTAAGTAACATATGCAGCAATCTCAGAAGACAGCTACTCAACCCGGTAGATATATTCTTACTGATCCAGCAAACATGTGATCATCCTCTGAATGAGAGGTTGAGGGAGAGTTATAAAATTGTGTGGATTCCACTTCCATCTTCTAATACATGGACTGAAGCTGAAGAAAGTAGTTTTAATTTTCTGTCAGATTCATTGCCTTGGCATGCAGTTCGGAAACCAAGATTACTTAGCTCAGCAGTGGTGAAGTACATAAGGGAACAATTGAACTACAAGGATGAGACCATCATGGTGGCTCTAGATTCAAAAGGCAAGGTTACAAATTACAATGCTCTTGATATGATCAAGATTTGGGGAGCCGAAGCATATCCCTTTTCGGCTTCAAAAGAGGAAGAGCTGTGGCAAGACAAGAATTTGTCAATGCAACTTTTGCTGGATGGCATCAATCCTCTCCTTGCTTACTGGGTTGAGCAAGGCAAAAATATATGCCTTTATGGGAGTGAGAACTTGGTTTGGATCCAACAATTCAATGATAAGATAACTGAGCTCAAACGAGAAGGTCTGAAGCTGGAAGCAATATTTGTTGGTAATAGTCAATCAGGTGAAAATGTTAAGCAAATAATAGCAAGGAGTGGTCTCAGTGATCCACTTTCATTCACAAATGTGCAATTCTTTTGGCTTCGGTTGGAGAGTATGCGAAGGTCTAAATTCAGACTAGGGAAGACACCAAGTTCTGATCATGTATTGGCCGAGTTGTCAGCTTTGCTGGACATGGATGATGGAGAAGAAAGTTGGGCTGTGATTGGATGTGGCAGTTCAACCGATATTTTTAGGCTTCAACGGATGCAGGTGATGGAATTCTTAAGGAACTGTTCTGAGGGGAGAGAAAATATAACCAAGTTTGGATTGTCAAGTGCTCTAAGAAACTTCCTAGACCCTGATTTTGTTGCTGAGAGTTGCACTCACACTTACTTTGTTCCCTCAAGAGAAAATGAAAGACTAAGTTCAGGAACTGTTATTTGTCAAGTTTGCAAGCGTCCCATGAAGAAGTTTGTGGTGTACCAGCCATGA 1650 0.4036 MQHDILIKKLLLTHDPDGRRLDSETMLLAVGNIMFHASTIIGAFNLYSASFQKNDITEIETIGCSEPVGFIITKLCKILCKCSGESGDVNSRIINLFDLIGKYSWDAKVVLVLAAFAVRYGEFWQLKQLYHGNTLAALISSIKQLPYNLKPLKLQIKALSLLVKTMMDVAMCIIKYSDSTIIASWELSSLAYRLSNICSNLRRQLLNPVDIFLLIQQTCDHPLNERLRESYKIVWIPLPSSNTWTEAEESSFNFLSDSLPWHAVRKPRLLSSAVVKYIREQLNYKDETIMVALDSKGKVTNYNALDMIKIWGAEAYPFSASKEEELWQDKNLSMQLLLDGINPLLAYWVEQGKNICLYGSENLVWIQQFNDKITELKREGLKLEAIFVGNSQSGENVKQIIARSGLSDPLSFTNVQFFWLRLESMRRSKFRLGKTPSSDHVLAELSALLDMDDGEESWAVIGCGSSTDIFRLQRMQVMEFLRNCSEGRENITKFGLSSALRNFLDPDFVAESCTHTYFVPSRENERLSSGTVICQVCKRPMKKFVVYQP 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1912 549 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 205 548 IPR039299 GO:0010088
Aed7g1912 549 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 205 548 - -
Aed7g1912 549 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 2 177 - -
Aed7g1912 549 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 178 205 IPR039299 GO:0010088
Aed7g1912 549 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 2 177 IPR039299 GO:0010088
Aed7g1912 549 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION C 178 205 - -
Aed7g1912 549 Coils Coil 366 386 - -
Aed7g1912 549 Pfam Sieve element occlusion N-terminus 3 177 IPR027942 -
Aed7g1912 549 Pfam Sieve element occlusion C-terminus 321 548 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1912 Aed-Chr7 22184352 22187267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1912 - - gmx:100819823 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1912 7 22184352 22187267 Aed7g1912 7 22184352 22187267 ECH
Aed5g1937 5 22394445 22398192 Aed7g1912 7 22184352 22187267 PCT