Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1937 ATGGCAATGGTTCCACGAAAGATGCAATCCAGGCCTAGCCGCCATATTTTTTCTGCATCAGATGACACTACAATGACCAAACATATTTGTGCCACTCATGCTCCTGTTGATGGACACATTGACGTTAGACCTCTTCTTCATCTTGTTCAAGACATTTTTCACCGTGCTGCCTCTCTTATCCCTGGTGTCATTCTTCAGGAAAAACATGTGCAAGTGGATGCCAGTGCCTACCAATCTGATTTAGCTGGCGTGCTAGATATATCGTACCACACAATCAACAAAATTTCCTGCGAGATATGTTGCAAGAGTTCGAGTGGTGGAGATGTGCATGCCACAACCATGGGAATACTGGGAATGCTCTCAAGCTATTCATGGGATGCGAAGGTGGTGATAGCGTTGGCAGCATTTGCAGCCAACTTGGGGGAGTTTTGGCTCGTGGCTCACCTTTATGGCACCAACCGTCTTGCTAAGTCTGTTGCAAAGTTGAAGCACATCCATGAAACACTGGAACAGGTGGATGATTTGGGGCCAAAGTTTCAAACAATCAACAACCTTGTCAAGGCAATGTTGGATGTAACCAATAACATTGTCCAATTCCATGAGCTTCCCTCTCAGTACATTGACCCTGAGGCACCAGAGACGTTGATTGTTTCCTCTCTTATTCCCGGTGCTGTCTATTGGACCATTCGGAGTATTGTGTCCTGTGCATCCCATATTTTAGGCATAACTGGCTTGGGTCAAGGATATATGACATCAACAACAGAGACTTGGGAGCTTTCGAGTTTGGCTCATAAGCTTGATAACATAAATAGTCACCTTCGAAAGCAACTCATTCTTTGTCATCAGCATTTAGATGACAACAAACAGAGAGAATCCTTTGAAACACTTCGGCTCCTTTTTGAGACATCCCACCAAGATAATTTGAAAGTTCTCAAAGCTATGTTCTGCAGCAAGGATGATCCGTTGCCGCTGTTTGATGGTTCTTCCAAACAAAGGGTTAGCATTGAGGTGTTGAGGAGGAAAATTGTGCTACTCTACATAACAGACCTACATAATGTCCCAGAGCAAGAGCTTGTGATTTTTGAACAAATGCACCAAGAGTCACGTCAGGAATCAACCAGGTTAGAGAGTCAATACGAACTCGTTTGGATTCCAGTTGTGGACAAAGAAATCCCATGGACTGACGTGAAACCAAAGTTTGAGAAGCTGCAATCAATGATGTCATGTTACTCACTCTATGACCCTTATCTATTGGAGCCCGCAACCATCAGGTACATCAAAGAGGTATGGCTTTTCAAAACAAAGCCTATTCTTGTAGTGTTGGATCCCTTAGGAAAGGTTGTGAATCTGAATGCAATCCCCATGATGTGGATTTGGGGAAGCATGGCTTATCCTTTCTCTAGCTCAAGGGAGGAAGCACTGTGGAATGAGGAAACATGGGGACTTCTACTATTGGCAGATTCAATTGATCCATCGCTCTTGGAATGGATATCAGAAGGCAAATATATATGCTTGTACGGAGGGGAGGATATTGAGTGGATCCGTAAATTCACAAGCACTGCATATTCACTGGCAAAAGCTCTGAAACTACCACTAGAGATGATTTATGTGGGGAAAAGCAATCCAGGAAAGAAAGTTCAAGAGATCAACAATGCCATACTAGCAGAAAAACTGAGCAGCGTACTTCCGGACATAGCCGTAATTTGGTTCTTCTGGGTTAGGCTAGAGAGCATGTGGCACTCCAAATCACAGCAGAGCAAAACAGTAGAGAATGACCACATCATGCATGAAGTCATGAGAATCCTAACCTACGACAGCAGCGCCCCAGGATGGGCAATGATTAGTCAAGGCATGGGAAAGATGGCACAGGGGAAAGGAGACACATTTCTGAAGTGCCTGAATGAACATGAGCAATGGAAGGAAGCAGCAAAAGAGAAAGGGCTTTTGCCAGCAATGGATGATTATATAAAAGGCCTCCAAACCCCTCACCACTGCAACCGCTTGATACTCCCAGGAACCAGTGGAGGAACACCAGACAAAGTGGCCTGTGCTGAATGTGGTCGAACAATGGAAAAGTTCTACATGTATCGCTGCTGCAATGAGTAA 2106 0.4449 MAMVPRKMQSRPSRHIFSASDDTTMTKHICATHAPVDGHIDVRPLLHLVQDIFHRAASLIPGVILQEKHVQVDASAYQSDLAGVLDISYHTINKISCEICCKSSSGGDVHATTMGILGMLSSYSWDAKVVIALAAFAANLGEFWLVAHLYGTNRLAKSVAKLKHIHETLEQVDDLGPKFQTINNLVKAMLDVTNNIVQFHELPSQYIDPEAPETLIVSSLIPGAVYWTIRSIVSCASHILGITGLGQGYMTSTTETWELSSLAHKLDNINSHLRKQLILCHQHLDDNKQRESFETLRLLFETSHQDNLKVLKAMFCSKDDPLPLFDGSSKQRVSIEVLRRKIVLLYITDLHNVPEQELVIFEQMHQESRQESTRLESQYELVWIPVVDKEIPWTDVKPKFEKLQSMMSCYSLYDPYLLEPATIRYIKEVWLFKTKPILVVLDPLGKVVNLNAIPMMWIWGSMAYPFSSSREEALWNEETWGLLLLADSIDPSLLEWISEGKYICLYGGEDIEWIRKFTSTAYSLAKALKLPLEMIYVGKSNPGKKVQEINNAILAEKLSSVLPDIAVIWFFWVRLESMWHSKSQQSKTVENDHIMHEVMRILTYDSSAPGWAMISQGMGKMAQGKGDTFLKCLNEHEQWKEAAKEKGLLPAMDDYIKGLQTPHHCNRLILPGTSGGTPDKVACAECGRTMEKFYMYRCCNE 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1937 701 Pfam Sieve element occlusion N-terminus 20 304 IPR027942 -
Aed5g1937 701 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 701 IPR039299 GO:0010088
Aed5g1937 701 Pfam Sieve element occlusion C-terminus 469 700 IPR027944 -
Aed5g1937 701 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1937 Aed-Chr5 22394445 22398192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1937 - - gmx:100799626 1291.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1937 5 22394445 22398192 Aed5g1937 5 22394445 22398192 ECH
Aed5g1937 5 22394445 22398192 Aed7g1912 7 22184352 22187267 PCT