Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1900 ATGGCAGCAACAATGGCTATGATGATAAACTCCAAGTGCGTGAACACAACAGGGTCACCCAATTTGCACACCCCTAAGCTCACACCTTCAAAACCCACCATTTCTCTCTTCTCCCTTCAGAACCTCCCAAAGGGACTAACTGTCAACGCGTCAACTTCCATAGCAGGCACTGCCATCGCGGGAGCAATATTTTCTTCACTCGCTAACTGCAACGCAGCCTTGGCTGCCTCGCAGATAGCCGAAATAGCAGAAGGTGGCGATAACCGTGGGCTAGCATTATTGCTGCCATTAATTCCCACCATAGCATGGGTTTTGTTCAACATTCTGCAGCCAGCGCTGAACCAACTCAACCGCATGCGTAGCAGCACCAGCAAGGGGGTCATCATTGGGCTTGGTCTTGGTGCATCGGGCATGCTGTCCAGCCCAGAAGCATCGGCCAGTGAGATTGCTATGATTGCCGATGCTGCCGGTGACAACAGGGGGCAGCTTCTGCTGTTTGTGGTTACACCAGCGATTCTTTGGGTTCTGTACAACATTTTGCAACCCGCACTCAACCAGCTTAACAGAATGAGATCCAAGTGA 582 0.5137 MAATMAMMINSKCVNTTGSPNLHTPKLTPSKPTISLFSLQNLPKGLTVNASTSIAGTAIAGAIFSSLANCNAALAASQIAEIAEGGDNRGLALLLPLIPTIAWVLFNILQPALNQLNRMRSSTSKGVIIGLGLGASGMLSSPEASASEIAMIADAAGDNRGQLLLFVVTPAILWVLYNILQPALNQLNRMRSK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1900 193 Hamap Photosystem II protein Y [psbY]. 87 121 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Aed7g1900 193 Pfam Photosystem II protein Y (PsbY) 87 119 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Aed7g1900 193 Pfam Photosystem II protein Y (PsbY) 158 190 IPR009388 GO:0009523|GO:0015979|GO:0016021|GO:0030145
Aed7g1900 193 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 193 IPR038760 GO:0009523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1900 Aed-Chr7 22105636 22106217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1900 K02723 - gmx:100814665 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1900 7 22105636 22106217 Aed7g1900 7 22105636 22106217 ECH
Aed5g1930 5 22370067 22370648 Aed7g1900 7 22105636 22106217 PCT