Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1879 ATGCCTCACTACTTGCCACTTCGTTGGGAGAGCACAGGAGAACAATGGTGGTACGCATCTCCGATCGACTGCGCCGCCGCGAATGGCCACTACGATCTGGTGGTGGAGCTTCTCCACCTCGACGCCAACCTCCTCATCAAGCTCACTTCCCTCCGCAGAATCCGGCGCCTCGAAACCGTGTGGGACGACGAGAAACACCTCCAGAACGCCGTCGCGAAATGCCGCTCGCAGGTTGCGAGGAACCTCATGCTGGAATGCGAGACAGGAAGAGGACACAAAAACAAACACAAACACAACTCTCTCGTTCGCGCCGGCTACGGAGGGTGGCTTCTCTACACCGCCGCCTCAGCCGGTGACGTGGACTTCGTTCGGGAACTGGTGGAGAGGTACCCTGCGCTGGTGTTCGGAGAAGGAGAGTATGGAGTGACTGATATACTCTATGCTGCGGCGAGGAGCAATAGCTGTGAGGTGTTTGAGCTTCTGCTTCGCTCTGCTCTCTCGCCGTCGCAAGTGGAAGAGGTTTACGAGAGGGACATGATGAACAGAGCCGTTCATGCTGCTGCCAGAGGAGGCAACTGGGACATGCTGAAACGGCTTTTGGGAAACGGTTCTGACGTTTTGGGGTTTAGAGATGCTCAAGGATGCACTGTTCTGCATACTGCAGCTGCTAGAGGACAGGTTCAGGTGGTGAGAAATCTAGTTGCGTCATTTGATGTTGTAAACTTAACAGATGATCAAGGGAACACAGCATTGCACATAGCTTCTTACGGTGGTCACTTACCAGTGGTTGAGATTCTGATTCTCGCATCCCCCTCGCTAGCATTGTTAACCAATCACTACGGAGATACTTTTCTTCATATGGCAGTGTCTGGTTTCAGAAGTCCCGGTTTCCGAAGACTGGACAAACATACTGAGCTCATGAGGCAATTGGTAAGTGGAAAGATTGTGAACTTGGAAAAGAACAACCTCATCAATGTTAAGAACAATGATGGAAGAACGGCTCTTCATGTATCCGTGATTGATAATATTCAGTTTGAGTTAGTGGAGTTGTTGATGTCTGTGCCATCAATTGATTTGAACGTTTGTGATGCTGATGGGATGACCCCTTTGGATCTTTTGAAACAAAGGCCACGATCAGCATCATCTGATATTTTAATCAAGCAAGTGATTTCAGCTGGAGGGGTCTCAAAATGTGAGGATGGTGATGGTGTGGCAAGAAATGCTCTTTTCACTCATCACAAAGCTCATGTCATTGGAGGTAGTCCTGGGACTTCGTTTAGAATACCAGATGCAGAGATTTTCTTGTACACTGGCATTGAGAATTCATCAGATGCCGCCACCAATTGTGATCATGATCAAGGAAGTGTGGAATCATATTCATGCTCAAATGAACTAAGCAATGTTTCTGACTCACCCAATAACTCCCCACATAACAAGAAGCCTAACTCTAACTCTGTCAATGTAAGGCGCTCTAAGTTTCGTCTACGCTGGCCTATGAGAAGAGAGACAAAAACAGTTGCCTCAGAATTGGAACATGATGATGATGATTCTCTTGATCCTCCATTCAGTTCAAGTAGAAACTTGGAAGAGTTTCCAATTCCGTTGCGGCGAAGATACTCACAATCACAACCATGCTCCCTTCCAAGTCCATCCTCCTCCTCCAAAGTGAAATTCAGTGCAGGCCTAATGCAAGGTGTGATTCAGCTAAAGCCACATTCTGCTAATTCAACTCCTCGTCCTTTCCAAGAACTATCCGTGGCTTCTCTTTCTTACATCAAGAAACAAAAGGGTGTTGATGTAATGGGACCCTCTTGCTCTAATCGATCAATAGATGACGACGCCACACTTCTATTGAACTACAAACAGTGTTCCTTCAATAAGAAATTTATGAATGGGTATTTTTCTTTTGGAGCACGGGGCATGGAAGCTGTTGAAGATTCCAAAAGCTGCGCAAAGTCAAACAGCAGCTACAAACGTTTAAGTTCCATAGTTGCCTAA 1998 0.4705 MPHYLPLRWESTGEQWWYASPIDCAAANGHYDLVVELLHLDANLLIKLTSLRRIRRLETVWDDEKHLQNAVAKCRSQVARNLMLECETGRGHKNKHKHNSLVRAGYGGWLLYTAASAGDVDFVRELVERYPALVFGEGEYGVTDILYAAARSNSCEVFELLLRSALSPSQVEEVYERDMMNRAVHAAARGGNWDMLKRLLGNGSDVLGFRDAQGCTVLHTAAARGQVQVVRNLVASFDVVNLTDDQGNTALHIASYGGHLPVVEILILASPSLALLTNHYGDTFLHMAVSGFRSPGFRRLDKHTELMRQLVSGKIVNLEKNNLINVKNNDGRTALHVSVIDNIQFELVELLMSVPSIDLNVCDADGMTPLDLLKQRPRSASSDILIKQVISAGGVSKCEDGDGVARNALFTHHKAHVIGGSPGTSFRIPDAEIFLYTGIENSSDAATNCDHDQGSVESYSCSNELSNVSDSPNNSPHNKKPNSNSVNVRRSKFRLRWPMRRETKTVASELEHDDDDSLDPPFSSSRNLEEFPIPLRRRYSQSQPCSLPSPSSSSKVKFSAGLMQGVIQLKPHSANSTPRPFQELSVASLSYIKKQKGVDVMGPSCSNRSIDDDATLLLNYKQCSFNKKFMNGYFSFGARGMEAVEDSKSCAKSNSSYKRLSSIVA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1879 665 Pfam Ankyrin repeats (3 copies) 185 267 IPR002110 GO:0005515
Aed7g1879 665 MobiDBLite consensus disorder prediction 447 492 - -
Aed7g1879 665 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 661 - -
Aed7g1879 665 SUPERFAMILY Ankyrin repeat 110 386 IPR036770 -
Aed7g1879 665 ProSiteProfiles Ankyrin repeat region circular profile. 246 267 - -
Aed7g1879 665 SMART ANK_2a 140 170 IPR002110 GO:0005515
Aed7g1879 665 SMART ANK_2a 246 275 IPR002110 GO:0005515
Aed7g1879 665 SMART ANK_2a 280 320 IPR002110 GO:0005515
Aed7g1879 665 SMART ANK_2a 213 242 IPR002110 GO:0005515
Aed7g1879 665 SMART ANK_2a 106 135 IPR002110 GO:0005515
Aed7g1879 665 SMART ANK_2a 17 46 IPR002110 GO:0005515
Aed7g1879 665 SMART ANK_2a 330 361 IPR002110 GO:0005515
Aed7g1879 665 SMART ANK_2a 179 208 IPR002110 GO:0005515
Aed7g1879 665 Gene3D - 10 400 IPR036770 -
Aed7g1879 665 MobiDBLite consensus disorder prediction 505 527 - -
Aed7g1879 665 ProSiteProfiles Ankyrin repeat profile. 246 278 IPR002110 GO:0005515
Aed7g1879 665 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 661 - -
Aed7g1879 665 ProSiteProfiles Ankyrin repeat profile. 213 245 IPR002110 GO:0005515
Aed7g1879 665 MobiDBLite consensus disorder prediction 447 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1879 Aed-Chr7 21960454 21963653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1879 111 372 Miscellaneous Gene Families AT2G31820 30.741 5.37e-21 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1879 - - gmx:100796359 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1879 7 21960454 21963653 Aed5g1607 5 20295422 20299150 PCT