Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1607 ATGCCTCCCTCTAACTTCCCTCTTCGTTGGGAGAGTACAGGAGACAGATGGTGGTATGCATCTCCAATTGATTATGCAGCTGCAAATGGCCTCTATGATCTGGTAACTGAGCTTCTCCACCTTGACACAAACCTCCTCATTAAGCTCACCTCCCTTCGTCGAATTCGCCGCCTAGAAGCCGTGTGGGACGATGAGTCCAAGTTTGAGGATGTTGCCAAGTGCAGGTCCAAGGTTGCAAGGAATCTCATGCTTGAGTGTGAGACAGGAAGAGGGCACAACAACTCTCTCATCCTTGCAGGCTATGGTGGATGGCTTCTCTACACTGCTGCTTCGGCCGGGGATGTGGACTTTGTTCTTGAGCTGTTAGGGAGAGACCCTTTGTTGGTTTTTGGTGAGGGAGAGTATGGTGTCACTGACATGCTCTATGCTGCAGCCAGGGGCAAGAACTGTGAGGTCTTTAAGCTCCTTCTTCATTCTGCTCTTTCGAGAAAGGAGTGCCTTGCTGTTGATGGCAGTGATCAAGCAGAATTATTGGAGGAGAAGTTGGATGATGATGAAGGTTCCAAGGTTTTCAAGAGGGATGTGATGAATAGGGCCATTCATGCTGCTGCCAGAGGAGGGAATTGGGAAATACTGAAGCTGCTTCTAGAAAGTGTTTCTGTTTCTCAAATTTTGTCTTGTAGAGATGCCCAAGGATGCACTTTGTTGCATGCAGCAGCTGCAAGGGGCCAGGTTGAGGTGGTGAGAAATCTAATTGAATCCTATGATATCATCAACTCGGCTAATGCTCAAGGAAATACACCATTACACGTGGCATCTTACAGAGGCTACTTACCCGTTGTAGAGATTCTGATTGGAGCATCTCCCTCATTAGCAACATTAACCAATCACTATGGAGATACTTTTCTTCACATGGCAGTGGCTGGTTTCAGAAGCCCTGGTTTCTGCAGATTGGACAAGCACACTGAACTAATGAAGCAACTCACAAGTGAAAAGATTGTGAACATGAAGGACATCATCAATGTGAGGAACAATGATGGAAGAACAGCTCTTCATTTTGCTGTGATTCATAACATCCAATGCAATGTAGTGGAATTACTGATGTCTGTTCCATCAATTGATTTGAACATTCGAGATGCTGTTGGAATGACCCCTTTGGATCATCTTAGGCAAAGATCAAGATCAGCATCTTCTGATGTTTTAATCAAGCAGTTAATTTCAGCTGGAGGGATATCTAATTGTAAGACAAGAAATGTTCTTGTTAATCATCTTAGGACTCATGGCATTGGAGCAAGTCCTGGAACATCATTCAGAATACCAGATGGAGAGATATTGTTGTACACAGGCATTGAGAAATCATTATGTGATGCCAATTATGATCAGGCTAGTGTAGAATCAAATTCATGGTCAAGTGAAATAAACAACTATGACTCAGCCAATTCCCCATGTGACAGCAAGTCTAGTTCTGTCAATTATGGTGCAAGGCGCTTAAAGTTTCTGCTGCAAAGTTCTAGGAAAAGAGACACAAAAGAAGAAGATGCCTCAGAGTTTGAAGATGATGTTTCTGTGAATTCTTTCAGTTTAAGGAACAACAACTTGGAGGACTTTCCAATCCCATTGAGGCAAAGATACTCAACAAAAATGTGTTCTCTTCCAAACAACAAAAGAACACTATCTATAAGGACTTACCTTCCAAGTCCTTCAGCTAAAAAATATTTCCATGCAGGCCTAGTGCAAGGTGTGATTAAGGTAAAGCCACAAGTGCCACTACATGTTCATTCAACTTCTAATCTTTTCCAAGAACTATCTATCTCTTCTCATTCTTCGAATAATAAGCAAAAATGTGTTGATATAATGGGACCCTCTTGCTCCAATGGACCAATGGATGGTGGTGGCACCCAACAACAGTTGAACTATAAGCAGGGCTCTATCAATAAGAAATTGATGAACAAATATTTTTCTTTTGGAGCACATGGCCAGGCTTTGGAAGATTCAAAAACCTGCACAATGTCAAATGGCAGTAGTACTAAGTATTATAGTTCTTTAGTTGCATAA 2055 0.4238 MPPSNFPLRWESTGDRWWYASPIDYAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLEAVWDDESKFEDVAKCRSKVARNLMLECETGRGHNNSLILAGYGGWLLYTAASAGDVDFVLELLGRDPLLVFGEGEYGVTDMLYAAARGKNCEVFKLLLHSALSRKECLAVDGSDQAELLEEKLDDDEGSKVFKRDVMNRAIHAAARGGNWEILKLLLESVSVSQILSCRDAQGCTLLHAAAARGQVEVVRNLIESYDIINSANAQGNTPLHVASYRGYLPVVEILIGASPSLATLTNHYGDTFLHMAVAGFRSPGFCRLDKHTELMKQLTSEKIVNMKDIINVRNNDGRTALHFAVIHNIQCNVVELLMSVPSIDLNIRDAVGMTPLDHLRQRSRSASSDVLIKQLISAGGISNCKTRNVLVNHLRTHGIGASPGTSFRIPDGEILLYTGIEKSLCDANYDQASVESNSWSSEINNYDSANSPCDSKSSSVNYGARRLKFLLQSSRKRDTKEEDASEFEDDVSVNSFSLRNNNLEDFPIPLRQRYSTKMCSLPNNKRTLSIRTYLPSPSAKKYFHAGLVQGVIKVKPQVPLHVHSTSNLFQELSISSHSSNNKQKCVDIMGPSCSNGPMDGGGTQQQLNYKQGSINKKLMNKYFSFGAHGQALEDSKTCTMSNGSSTKYYSSLVA 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1607 684 Gene3D - 12 217 IPR036770 -
Aed5g1607 684 Gene3D - 218 408 IPR036770 -
Aed5g1607 684 ProSiteProfiles Ankyrin repeat region circular profile. 231 253 - -
Aed5g1607 684 Pfam Ankyrin repeats (3 copies) 200 289 IPR002110 GO:0005515
Aed5g1607 684 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 1 675 - -
Aed5g1607 684 SUPERFAMILY Ankyrin repeat 105 402 IPR036770 -
Aed5g1607 684 ProSiteProfiles Ankyrin repeat profile. 231 263 IPR002110 GO:0005515
Aed5g1607 684 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 675 - -
Aed5g1607 684 ProSiteProfiles Ankyrin repeat profile. 264 296 IPR002110 GO:0005515
Aed5g1607 684 Pfam Ankyrin repeat 346 379 IPR002110 GO:0005515
Aed5g1607 684 ProSiteProfiles Ankyrin repeat region circular profile. 264 285 - -
Aed5g1607 684 SMART ANK_2a 135 165 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 298 338 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 231 260 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 18 47 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 195 223 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 346 377 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 101 130 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 264 293 IPR002110 GO:0005515
Aed5g1607 684 SMART ANK_2a 381 414 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1607 Aed-Chr5 20295422 20299150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1607 106 387 Miscellaneous Gene Families AT2G31820 31.034 7.78e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1607 - - gmx:100791999 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1879 7 21960454 21963653 Aed5g1607 5 20295422 20299150 PCT