Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1878 ATGGGCAAGTCCGAGGAATCCAATGATTTCGCTGCCAAGCAGAAGGCCATTGACGATTGGCTTCCGGTCACGGCTTCCCGAAGTGCCACATGGTGGTCTTCGGCTTTCCACAATATCACCGCCATGGTTGGCGCAGGTGTACTTAGTCTCCCCTATGCCATGTCAAATTTGGGCTGGGGTCCCGGTGCTGCTGTGCTTATCTTGTCATGGATAATCACTCTCTACACCCTTTGGCAAATGGTTGAGATGCACGAAATGGTGCCGGGGAAAAGATTTGACAGGTACCATGAGCTGGGCCAAGAGGCCTTCGGAGAAAAGCTGGGTCTCTGGATTGTGGTTCCCCAACAGGTTATTGTTGAAGTTGGCACTTGCATTGTCTATATGGTCACTGGGGGCAAGTCATTGAAGAAAGTTCATGAGACTCTTTGTCCTAATTGCCATAACATTAAGACTTCATATTGGATTGTTATATTCGCTTCTGTGAACTTCGTTCTTGCGCAATGCCCCAGCTTCAACTCCATCTCTGCAATCTCTTTAGCTGCAGCTGCCATGTCTATCGTATACTCAACCATCGCTTGGTGTGCGGCTATACACAAGGGGATTGATGAACATGTGGATTATGGTTTCAGAGCCACCTACACAACTGCTGATAAAATATTCAACGCCTTTTCCGCCTTGGGTGATATAGCATTTGCCTACGCAGGTCACAGTGTGGTGTTGGAAATTCAAGCAACCATGCCTTCAACCTTAGAAGTACCTTCGAAGATACCCATGTGGAAGGGGGTTGTTTTGGCATACATAGGAGTATTTGCCATGCCCGTGTTTGATATGATGGAAACCTACCTGGTTAAGACATTGGATTTTTCACCTTCCACTGCACTCCGAATAATAACTCGCACTATATTTGTTGCGTTGACCATGCTAATTGGCATATGCGTCCCATTCTTTGGCTCTCTTCTTGGATTTCTGGGAGGCTTTGCGTTTGCCCCAGCATCGTTTTTTTTGCCCTGTATCATATGGCTTAAGCTCAAAAAGCCCAATAAATTCGGCCTGATTTGGACAATAAACTGGTTCTGCATTGTTTTTGGGGTAGTGTTGATGGTATTATCTCCGATTGGTGCTCTAAGGAATATCATCCTCACGGCCAGCAACTACAAGTTTTTCTCGTAA 1170 0.4624 MGKSEESNDFAAKQKAIDDWLPVTASRSATWWSSAFHNITAMVGAGVLSLPYAMSNLGWGPGAAVLILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQEAFGEKLGLWIVVPQQVIVEVGTCIVYMVTGGKSLKKVHETLCPNCHNIKTSYWIVIFASVNFVLAQCPSFNSISAISLAAAAMSIVYSTIAWCAAIHKGIDEHVDYGFRATYTTADKIFNAFSALGDIAFAYAGHSVVLEIQATMPSTLEVPSKIPMWKGVVLAYIGVFAMPVFDMMETYLVKTLDFSPSTALRIITRTIFVALTMLIGICVPFFGSLLGFLGGFAFAPASFFLPCIIWLKLKKPNKFGLIWTINWFCIVFGVVLMVLSPIGALRNIILTASNYKFFS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1878 389 Pfam Transmembrane amino acid transporter protein 28 271 IPR013057 -
Aed7g1878 389 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 269 383 - -
Aed7g1878 389 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 8 269 - -
Aed7g1878 389 PANTHER OS05G0424000 PROTEIN-RELATED 269 383 - -
Aed7g1878 389 PANTHER OS05G0424000 PROTEIN-RELATED 8 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1878 Aed-Chr7 21955173 21957905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1878 1 389 Organic Solute Cotransporters AT1G24400 61.991 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1878 - - gmx:100807881 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1878 7 21955173 21957905 Aed5g1609 5 20300731 20302169 PCT