Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1609 ATGCATGAAATGGTACCTGGTGTGAGATTCGATAGGTATCATGAACTGGGACAACATGCATTTGGTGAGAAGTTAGGTCTCTACATTGTGGTTCCTCAACAACTACTTGTTGAGGTTGGCACGTGCATTGTGTACACGGTCACGGGAGGAACATCATTGAAGAAGTTTCACAACAGTGTTTGCCCATCGTGTAAAAACATTAGAACCTCGCATTGGATCATGATCTTCACTTCTATAAACTTCATTCTGTCTCTCTGTCCCAACTTCAACTCTATTTCTGCTGTCTCTTTGGCTGCAGCAATCATGTCTATTGCTTACTCAACCATTGCTTGGGTGGCTTCGATTAACAAGGGAACTCTACCAGATGTGGACCATGGCTACAAAGCCCACAACACTGCAGATGGCCACAATGTGGTTTTGGAAATCCAAGCGACAATACCTTCTACTCCTGAGAATCCTTCCAAGAAAGCAATGTGGAAAGGAGTTATAGTTGCATATATAGGAGTCGCATTTTGCTATTTCCCTGTGGCCTTCGTTGGATACTATATATTTGGCAACGCTGTCGATGACAATATTCTCATCACAAACCCGCTTGGCTCATTGCTGCAGCTAACATGTTTGTTATTGTACACGTCATTGGTGTTCTCCATGCCTGTGTTTGATATGTTGGAAACCTTTTTGATCAAGCAATTAAATTTTCCTCCTTGCTTGACACTCCGCTTTGTCGCTCGCACTGCATTTGTAGCAATGACAATGCTAATTGCCATATGCATCCCATTCTTCGGTTCTCTTCTTGGATTTTTAGGAGGATTTGCCTTTGCCCCGACATCATACTTTCTACCCTGTATCATCTGGCTTAAACTCTACAAACCAAAGAGATTTAACATGCATTGTGCTTGGGGTGCTATTGATGGTGCTAGCTCCAATTGGTTCATTAAGAAAAATTATTATTTCAGCCCAGAAATACAACTTCTTTTCCTAAATTAA 987 0.4174 MHEMVPGVRFDRYHELGQHAFGEKLGLYIVVPQQLLVEVGTCIVYTVTGGTSLKKFHNSVCPSCKNIRTSHWIMIFTSINFILSLCPNFNSISAVSLAAAIMSIAYSTIAWVASINKGTLPDVDHGYKAHNTADGHNVVLEIQATIPSTPENPSKKAMWKGVIVAYIGVAFCYFPVAFVGYYIFGNAVDDNILITNPLGSLLQLTCLLLYTSLVFSMPVFDMLETFLIKQLNFPPCLTLRFVARTAFVAMTMLIAICIPFFGSLLGFLGGFAFAPTSYFLPCIIWLKLYKPKRFNMHCAWGAIDGASSNWFIKKNYYFSPEIQLLFLN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1609 328 Pfam Transmembrane amino acid transporter protein 2 297 IPR013057 -
Aed5g1609 328 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 1 298 - -
Aed5g1609 328 PANTHER OS05G0424000 PROTEIN-RELATED 1 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1609 Aed-Chr5 20300731 20302169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1609 1 296 Organic Solute Cotransporters AT5G40780 62.069 3.70e-141 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g1609 - - gmx:100809608 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1878 7 21955173 21957905 Aed5g1609 5 20300731 20302169 PCT