Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1876 ATGGCTTCCATTGCCGGATCCAACTGCGTCGCTCTCCGAACCGCCAACTTCGGCGTCTCCGGTAACCGGAAAATCGGTCAGATCCGGCAATGGTCTCCGCTTCTCACGAATCTCCGTCCGGTTACCGGTCTTCGCCACCGATCGAACACTCCGTTTAGTTCCTCCGGTGTGAGAGCACAGGTTGCTACTCTGGAGGAAGCAGGAACCGGAGCAATTCCGAAAGTGGAAGCGCCGGTTGTAGTGGTTACCGGAGCTTCCAGAGGCATCGGCAAAGCGATTGCTCTGTCGTTAGGTAAAGCAGGTTGCAAGGTTCTGGTCAACTATGCAAGGTCCTCCAAGGAAGCCGAGGAGGTTTCCAAGGAGATTGAAGCCTTTGGTGGGCAAGCTCTTACATTTGGAGGAGATGTTTCTAATGAGGCGGACGTGGAGTCTATGATTAAAACTGCAGTTGATGCTTGGGGAACAGTTGATGTATTGATAAACAATGCAGGAATAACTAAAGATGGTTTATTAATGAGAATGAAGAAATCTCAATGGCAGGATGTTATTGATCTAAATCTCACTGGTGGAAGGATAGTCAATATTGCATCAGTTGTTGGTTTGGTTGGCAATGTTGGACAAGCCAATTATAGTGCTGCAAAAGCAGGAGTAATTGGCCTGACAAAAACTGTTGCAAAGGAATATGCTAGCAGAAGCATCACTGTTAATGCTGTTGCTCCAGGGTTTATTGCATCTGACATGACTGCCAAGCTTGGGCAAGACATTGAGAAAAAGATTTTGGAGACAATCCCATTAGGAAGATATGGCCAACCAGAGGAAGTTGCTGGACTGGTGGAATTCTTAGCTCTTAATCAAGCTGCCAGTTACATCACCGGGCAGGTTTTCACTATCGATGGAGGTATGGTGATGTAA 912 0.4737 MASIAGSNCVALRTANFGVSGNRKIGQIRQWSPLLTNLRPVTGLRHRSNTPFSSSGVRAQVATLEEAGTGAIPKVEAPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEAFGGQALTFGGDVSNEADVESMIKTAVDAWGTVDVLINNAGITKDGLLMRMKKSQWQDVIDLNLTGGRIVNIASVVGLVGNVGQANYSAAKAGVIGLTKTVAKEYASRSITVNAVAPGFIASDMTAKLGQDIEKKILETIPLGRYGQPEEVAGLVEFLALNQAASYITGQVFTIDGGMVM 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1876 303 PRINTS Glucose/ribitol dehydrogenase family signature 154 165 IPR002347 -
Aed7g1876 303 PRINTS Glucose/ribitol dehydrogenase family signature 231 248 IPR002347 -
Aed7g1876 303 PRINTS Glucose/ribitol dehydrogenase family signature 79 96 IPR002347 -
Aed7g1876 303 PRINTS Glucose/ribitol dehydrogenase family signature 210 229 IPR002347 -
Aed7g1876 303 PRINTS Glucose/ribitol dehydrogenase family signature 264 284 IPR002347 -
Aed7g1876 303 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 197 225 IPR020904 GO:0016491
Aed7g1876 303 Gene3D - 69 188 - -
Aed7g1876 303 Gene3D - 189 303 - -
Aed7g1876 303 Pfam Enoyl-(Acyl carrier protein) reductase 84 301 - -
Aed7g1876 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 165 IPR002347 -
Aed7g1876 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 200 208 IPR002347 -
Aed7g1876 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 210 229 IPR002347 -
Aed7g1876 303 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 4 35 303 - -
Aed7g1876 303 PANTHER SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER 35 303 - -
Aed7g1876 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 303 IPR036291 -
Aed7g1876 303 CDD BKR_SDR_c 79 302 - -
Aed7g1876 303 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 78 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1876 Aed-Chr7 21943303 21947391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1876 21 303 Acyl Lipid Metabolism Gene Families AT1G24360 65.333 1.12e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1876 K00059 - gmx:100809809 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1876 7 21943303 21947391 Aed5g1611 5 20307792 20309733 PCT