Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1852 ATGCCTTGCCGGAAAAGACAAAAGACATCGCCGGAAAACCTTTTTGACTCTCTCCCCGATGACCTCGTTCTCTCCATCCTCTGCAAACTCAGCTCCACAGCAACTTCCCCCTCCGATTTCATCAGTGTTTTATCAACGTGCAAGAGACTAAACACCTTGGGCCTTCACTCTCTTGTGTTATCAAAAGCATCCAACAAAACATTCTCAGTCAAAGCAAAAAACTGGTGCGACCCTCTTCACCGTTTCCTCAAACATTGTGTCGATGCCGGAAACATTGAAGCGTGTTACACTCTCGGCATGATTCGGTTTTACTGCTTGCAAAACAGAGGGAGCGGTGCGTCGCTGATGGCCAAGGCGGCGATGCACTCTCACGCGCCAGCGCTGTACTCGCTCGCGGTGATACAGTTCAACGGAAGCGGTGGCACGAAAAACGACAAGGACCTTCGGGCGGGTGTGGCGCTGTGTGCACGCGCGGCTTTCTTTGGTCACATCGACGCGCTGCGTGAGCTTGGCCATTGCTTGCAAGACGGTTACGGCGTTAAGCAGAACGTCGCGGAGGGACGACGCTTTTTGGTGCAAGCCAACGCGCGTGAACTCGCCGCCGTGCTCTCCGCCGGCAACATCAAGCGCCCCTGGCTGCCGTTTAACCACCACCCAGTTCCTCGGCTCCGGTCGGAAACAACCGGGTCGGGCTGCCCGTTGCTGAGTGATTACGGCTGCAACGTGCCGGCGCCGGAAGTGCACCCTGCGAGTCAGTTCATGTCAGAGTGGTTCGAAATTCGAGGCGGGTCGTCGGATTCAGGCAAGAGACTTTGTTCGCATTCGGGTTGCGGACGACCCGAGACGAGGAGGCACGAGTTTCGAAGGTGTTCGGTTTGTGGTGTGGTGAATTATTGCTCACGCGCGTGTCAGGCGCTTGATTGGAAGTTGCGGCACAAGGCGGAATGTGCTCCAGTGGTTGAGAGGTGGCTCGGTGACGACGTCGAAGATGTCGTCGGCGATGATGACGGCGGCGCCGCTGACGGAGTAATGGTGGTTAATAGTTAG 1047 0.5626 MPCRKRQKTSPENLFDSLPDDLVLSILCKLSSTATSPSDFISVLSTCKRLNTLGLHSLVLSKASNKTFSVKAKNWCDPLHRFLKHCVDAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMHSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFFGHIDALRELGHCLQDGYGVKQNVAEGRRFLVQANARELAAVLSAGNIKRPWLPFNHHPVPRLRSETTGSGCPLLSDYGCNVPAPEVHPASQFMSEWFEIRGGSSDSGKRLCSHSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKLRHKAECAPVVERWLGDDVEDVVGDDDGGAADGVMVVNS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1852 348 Gene3D - 262 320 - -
Aed7g1852 348 ProSiteProfiles Zinc finger MYND-type profile. 274 316 IPR002893 -
Aed7g1852 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 2 348 - -
Aed7g1852 348 PANTHER MYND DOMAIN-CONTAINING 2 348 IPR044508 -
Aed7g1852 348 SUPERFAMILY HCP-like 82 194 - -
Aed7g1852 348 Pfam MYND finger 277 316 IPR002893 -
Aed7g1852 348 SUPERFAMILY HIT/MYND zinc finger-like 272 320 - -
Aed7g1852 348 Gene3D Tetratricopeptide repeat domain 63 210 IPR011990 GO:0005515
Aed7g1852 348 SUPERFAMILY F-box domain 9 69 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1852 Aed-Chr7 21787380 21789813 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1852 - - gmx:100798136 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1852 7 21787380 21789813 Aed5g1636 5 20466818 20468925 PCT