Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1847 ATGAAGCAGCAGCAGCAAAGTACTAGATCAGATAGGTTTACGGGCCTGGGCCTGGGCCTGTTGGTGGCGGTGATAGCATGTGGGTCGATGATGAAGACGGCAAATGGTGCAGATGATTTGGCAACCAAGTGTTCGGCGGTGATTCAGAAGGTAATACCGTGTTTGGACTTCGCGACGGGAAAAGCAACAACGCCGGAAAAGAAATGTTGCGACGCGGCTGCTTCCATAAAAGAGAGCAACCCGGAGTGCCTTTGCTACATCATTCAACAGACCCACAAGGGTAGCCCTGAGGTTAAAAGCCTCGGCATTCAAGAGTCCAAGCTCCTTCAACTCCCTACTGTTTGCCACGTCAAAAACGCCAGCGTCACCAACTGTCCTAAGCTTTTGGGTCTATCTCCAAGTTCCCCCGATGCTGCCATATTCACAACAAACTCTACCAAGTCAACTCCTTCTGCACCTGGAACAACAAGCCCACAAATAACGACCCCGCAGAGCCAAAACGCATCGTATGGAAGCATGGCTAGACCTAGTGTGATGATGGGGGTGGCTTTGGCCATTGTTCTGGTTTCAATTCCAACCGATTTTTTCAGCATTTATACATGA 603 0.4992 MKQQQQSTRSDRFTGLGLGLLVAVIACGSMMKTANGADDLATKCSAVIQKVIPCLDFATGKATTPEKKCCDAAASIKESNPECLCYIIQQTHKGSPEVKSLGIQESKLLQLPTVCHVKNASVTNCPKLLGLSPSSPDAAIFTTNSTKSTPSAPGTTSPQITTPQSQNASYGSMARPSVMMGVALAIVLVSIPTDFFSIYT 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1847 200 Pfam Probable lipid transfer 33 125 IPR016140 -
Aed7g1847 200 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 125 IPR036312 -
Aed7g1847 200 MobiDBLite consensus disorder prediction 140 168 - -
Aed7g1847 200 CDD AAI_LTSS 53 117 - -
Aed7g1847 200 Gene3D - 41 123 IPR036312 -
Aed7g1847 200 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Aed7g1847 200 SMART aai_6 44 125 IPR016140 -
Aed7g1847 200 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1 20 192 - -
Aed7g1847 200 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 20 192 IPR043325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1847 Aed-Chr7 21754138 21756975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1847 43 191 Acyl Lipid Metabolism Gene Families AT1G27950 55.034 1.96e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1847 - - gmx:100499777 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1847 7 21754138 21756975 Aed5g1642 5 20502993 20503904 PCT