LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed5g1642	ATGAAAGTTGAGAAGATGAGAGTAGTAATAGTCCTAGTAGTAGTGTTGTTGTTCGGAGTAGTCCAAGAGTCGTCCACGACGGATATGGCGGCCAAGTGCAACCTGCTGGTTCAGAAAGTGCTTCCCTGTCTGAACTTCGCGACGGGGCAGGCGGCGGTTCCGACGAAGGATTGCTGCGAGGCGACGTCGGAGATCAAGAAGAGCGATCCGGAGTGTCTCTGCTTCGCGATCCAGCAGACTCACAAGGGCAGTCTGGAGGCCAAAAACATGGGCATTCAAGAGGGAAGGCTCCTCCAGCTGCCTTCTGCTTGTAACTTGAAGAATGCCACTTCCATCAACTGTCTAAAGCTTCTTGGTCTATCTCCAAACTCCCCGGACGCTGCTATCTTCAGGAATGCTTCGCTGAAAACAAAAACAACACCACCACCACCACCACTGTCCGACAAGGGCTCTTTTGGAAACATACTTAGACCTCTTCTCATGCCACACTTAATCATTCCTGTACTCGTCAATATTTATTCCTGA	525	0.5029	MKVEKMRVVIVLVVVLLFGVVQESSTTDMAAKCNLLVQKVLPCLNFATGQAAVPTKDCCEATSEIKKSDPECLCFAIQQTHKGSLEAKNMGIQEGRLLQLPSACNLKNATSINCLKLLGLSPNSPDAAIFRNASLKTKTTPPPPPLSDKGSFGNILRPLLMPHLIIPVLVNIYS	174

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed5g1642	174	SUPERFAMILY	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	31	114	IPR036312	-
	Aed5g1642	174	Pfam	Probable lipid transfer	20	114	IPR016140	-
	Aed5g1642	174	SMART	aai_6	33	114	IPR016140	-
	Aed5g1642	174	PANTHER	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1	8	144	-	-
	Aed5g1642	174	Gene3D	-	30	112	IPR036312	-
	Aed5g1642	174	CDD	AAI_LTSS	40	106	-	-
	Aed5g1642	174	PANTHER	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	8	144	IPR043325	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed5g1642	Aed-Chr5	20502993	20503904	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed5g1642	32	151	Acyl Lipid Metabolism Gene Families	AT1G27950	49.206	1.64e-39	131

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed5g1642	-		-	gmx:100799403	225.713

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed7g1847	7	21754138	21756975	Aed5g1642	5	20502993	20503904	PCT