Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1719 ATGAATTATCAGCTGCTGCATGTAGTTGCACTGTTGACACTGGTAGCATTTGGAAGCACAAGTTGGACTATAGAAGCATGCAATCCCGATGATTTGGAAGCATTGATGAGTTTCAAGAATGGAATTCAAAAAGACACATCTGGCCGTTTAGCAAAGTGGATTATTGGTCAGAGCTGTTGCAACTGGGAAGGTATTGTGTGTGAAAATGCAACCTCTAGAGTTACACAGATCAATCTCCCAGGATTCATTTCCACAGAGACAGATTTGTTTCAAACACAAATGACCGGGTTGGTTTCTCCTTCCATAGCACTTCTCACATCTCTTGAAATCATTGATCTTGGTGGCTTAGTTGGCCTTAGTGGACCAATTCCACAGACCATTGGTTTGCACCTGCCAAAGCTCCAAAGGCTCTACCTTTATGGCAACAACTTAACTGGTCCAATACCAGAAAGCATTGGAGAGTTCCAAAACCTCCAAGAACTGGCTCTGCAGGAAAATAGGCTATCCGGGTCGATCCCCGTGAGTGTTGGGAGCTTAAAGAGTCTCAAAAGGTTGCTGCTTTATTCAAATCAATTTTCAGGTATCATACCGGACTCACTTGGGAATTTGATGAATTTGGTAGAATTGGATGTTCATGACAATGCTCTTGTTGGTAATATTCCCAATAGTGTTGGTGAGATGCTGGCTTTGGAAAAGCTTGATCTTTCAAACAATTTTTTAACCGGGAAGATTCCTTCTTCATTAACCAATTTAACTGTCATTACTGTCTTGTACCTGAACACCAACTATCTTGAGGGAACCATTTCATTTCCTTCAAGATCTGGTGAAATGTCTTCTCTGGGATTCTTAAGACTCAATGATAATCTCCTTGTTGGGATTATACCTTCCAATATTGGCTATTTGGTATCTCTTCAGAGAGTTTCACTGTCAAACAACAAACTTGAAGGAGCCATTCCATCTAGTTTAGGCAATTTGGTATCACTGACTGAGTTATATCTCAGTGGTAACTTCTTATCTGACCAAATACCAAAATCAATAGGCCAACTTTCTCTGCTCATAATGTTGAACATCTCTAGAAATTTGATTGAAGGGCCATTACCCCAAGAGATGTCTTCCCTTCAAAATCTTCAAACACTTGATCTTTCTTTCAACCATTTGAATCTCTCTGCCATCCCAAAATGGATAGCAAACTTGTCATCACTTTCCAACATTTACTTTGCTAGTTGTGGAATCCAGGGCCAAATTCAAGATTTTTTCCAAACAACCAGTAGTCCAATACAGTCACTGGACTTGTCAGTGAACTTTCTCAGTGGAAACATACCATCATGGATAGGAAGCCTCAATCAACTCTACATGTTAAATCTCTCAAGGAACTCTCTTTATTCAGACATCCCCGATTCATTTAGAAATTTACAAGATTTAGGTGTCCTTGATCTTCACTCAAATAGGTTAACAGGCTCTCTTGCTCCTGTTTTTGACATAGAACAAGGTATTTCTGGGGGATCACTGAAATTTGTTGATCTTTCTGATAACAACTTCTCTAGTGGAATTGAGGAAATTGGTGTTGGAGGGCAATGTGGTATTCAGTTTATGAATTTGTCTCATAACCTTATGAAAGGTAATTTACCAAATTCAATTGGAAGACTGAATTCCCTCAACAGTTTGGATTTTAGCTTCAATGAATTAGGCTCCAACTTGCCAGAGGAGCTGGCGAATTTAACCTCATTGGAGAAATTGAAGCTGCAGCAAAATCAATTCACTGGTACAATTCCAAATGGATTTCTCAAGTTGTTAAATCTGAGAGAACTAAACTTATCTAACAATCTTCTTGAAGGGGAAATTCCAGAGGGAAAACCTTTGATTGACTTTCCTGAGAGTTCATATTCTGGAAATAAAGGTTTATGTGGAAAGCCTCTCAGTCCTTGTAAACTTTGA 1935 0.3917 MNYQLLHVVALLTLVAFGSTSWTIEACNPDDLEALMSFKNGIQKDTSGRLAKWIIGQSCCNWEGIVCENATSRVTQINLPGFISTETDLFQTQMTGLVSPSIALLTSLEIIDLGGLVGLSGPIPQTIGLHLPKLQRLYLYGNNLTGPIPESIGEFQNLQELALQENRLSGSIPVSVGSLKSLKRLLLYSNQFSGIIPDSLGNLMNLVELDVHDNALVGNIPNSVGEMLALEKLDLSNNFLTGKIPSSLTNLTVITVLYLNTNYLEGTISFPSRSGEMSSLGFLRLNDNLLVGIIPSNIGYLVSLQRVSLSNNKLEGAIPSSLGNLVSLTELYLSGNFLSDQIPKSIGQLSLLIMLNISRNLIEGPLPQEMSSLQNLQTLDLSFNHLNLSAIPKWIANLSSLSNIYFASCGIQGQIQDFFQTTSSPIQSLDLSVNFLSGNIPSWIGSLNQLYMLNLSRNSLYSDIPDSFRNLQDLGVLDLHSNRLTGSLAPVFDIEQGISGGSLKFVDLSDNNFSSGIEEIGVGGQCGIQFMNLSHNLMKGNLPNSIGRLNSLNSLDFSFNELGSNLPEELANLTSLEKLKLQQNQFTGTIPNGFLKLLNLRELNLSNNLLEGEIPEGKPLIDFPESSYSGNKGLCGKPLSPCKL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1719 644 Gene3D Ribonuclease Inhibitor 270 365 IPR032675 -
Aed7g1719 644 SMART LRR_sd22_2 373 390 - -
Aed7g1719 644 SMART LRR_sd22_2 227 253 - -
Aed7g1719 644 SMART LRR_sd22_2 549 568 - -
Aed7g1719 644 SMART LRR_sd22_2 325 351 - -
Aed7g1719 644 SMART LRR_sd22_2 203 222 - -
Aed7g1719 644 SMART LRR_sd22_2 131 157 - -
Aed7g1719 644 Pfam Leucine rich repeat 426 484 IPR001611 GO:0005515
Aed7g1719 644 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Aed7g1719 644 Pfam Leucine rich repeat 283 336 IPR001611 GO:0005515
Aed7g1719 644 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 3 643 - -
Aed7g1719 644 Pfam Leucine Rich Repeat 230 251 IPR001611 GO:0005515
Aed7g1719 644 Pfam Leucine Rich Repeat 599 615 IPR001611 GO:0005515
Aed7g1719 644 Pfam Leucine Rich Repeat 133 153 IPR001611 GO:0005515
Aed7g1719 644 SUPERFAMILY L domain-like 26 316 - -
Aed7g1719 644 ProSiteProfiles Leucine-rich repeat profile. 599 621 IPR001611 GO:0005515
Aed7g1719 644 Gene3D Ribonuclease Inhibitor 86 269 IPR032675 -
Aed7g1719 644 Gene3D Ribonuclease Inhibitor 23 85 IPR032675 -
Aed7g1719 644 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Aed7g1719 644 SUPERFAMILY L domain-like 227 627 - -
Aed7g1719 644 SMART LRR_typ_2 179 202 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 447 470 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 471 494 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 373 398 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 301 324 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 549 572 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 573 596 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 227 251 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 131 155 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 597 619 IPR003591 -
Aed7g1719 644 SMART LRR_typ_2 325 349 IPR003591 -
Aed7g1719 644 PRINTS Leucine-rich repeat signature 230 243 - -
Aed7g1719 644 PRINTS Leucine-rich repeat signature 373 386 - -
Aed7g1719 644 Gene3D Ribonuclease Inhibitor 366 644 IPR032675 -
Aed7g1719 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1719 Aed-Chr7 20610168 20612102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1719 4 644 Receptor kinase-like Gene Family AT4G08850 32.221 1.06e-84 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1719 - - gmx:102670178 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0277 11 2321706 2323616 Aed7g1719 7 20610168 20612102 PCT