Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0277 ATGAATTATCAGCTGCTACAGATAGTTGCAGTACTGCTGACAGTGATAGCATTTGGAGGAGCATTAAGGCAAGCAACAGGAGCTTGCAGTTCAGATGACTTGGAAGGTTTGTTGGGCTTCAAGAATGGCATTCAGATGGATACATCTGGCAGGTTGGCAAAGTGGGTTGGTGGGAGCTGCTGTGAATGGGAAGGTGTTGTCTGTGACAATGCAACAACCCCTAGAGTAACACAGATCAATCTCCCAGGGCTCATTGAAAAAGACTTGTTTCAGACCCAAATGATTGGCCAGCTTTCTCATTCCATAACACTCCTCACTTCTCTTGAAATCCTTGATCTTGGTGGCTTGGTAGGCCTCAGTGGGACAATTCCACAAACAATTGGCTTGCAAATGCTAAACCTCCAAAAGCTCAACCTTTTTGGCAACAATTTAACTGGCCCAGTACCAGAGAGCATTGGTGATTTGCCAAACCTCCAGGAACTTGAACTGCATGAAAATAGGATATCTGGGTCAATCCCTTCTAGCCTTGGAAGCTTAAAAAACCTCAAAAGGCTCCTGCTTTATTCAAACCAAATTTCAGGTACCATACCCTTTTCATTTGGGAATTTGACCAGTTTGGTAGAATTGGATGTTCATGACAATGCTATTATGGGTCATATACCCGACAGCATTGGTCAGATGCAAGCTCTGAAGAATCTTGATCTTTCAAGCAATATGCTTAGTGGAAGCATACCTTCTTCACTAACCAATTTAACTGCCATTTCAACTTTGTACATGGACACCAACTATCTTGAGGGAACCATCACATTTCCCTCAAGATCTGGTGAAATGCCTTCTCTGAGATTCCTAAGACTCCACAATAACCACCTGAGTGGGAATATACCTCCCACTTTTGGCTACTTAGTTTCTCTTCAAAGAGTTTCACTTTCAAACAACAAACTTGAAGGAGCATTGCCTTCTAGTTTGGGCAATTTGCATTCCTTGACAGAGCTTTACCTCAATGGCAACTCCTTCTCTGGCCAAATACCAAAATCAATAGGCCAACTCTCTCAGCTCATAATGTTGAACATTTCCAAAAATTTGATTGAATGGCCATTGCCTCAGGAGATGTCTTCCCTTCAAAACCTTCAGACACTTGACCTCTCTTTCAACCCTTTGAACCTCTCTTCCATTCCACCGTGGCTAACAAACCGCCTATCCTCACTCTCACGCATTTATCTTGCAGGCTGTGGCATCAAGGGCCAAATTCCAGACTTATTGCAAACAATACAAGAAGTGGACTTATCAGGGAACCTTCTTAGTGGATCCATACCATCATGGATAGGATCCCTCAGTCAGCTCTACTTGTTAAACCTGTCAATGAATTCACTTGATTCACACATACCTGATTCCCTCACAAACTTGCATGATCTTGGTGTTCTTGATCTTCACTCAAATAACTTAACAGGCTCCATAACTGGAGTATTTGACACTGGAGGGTCACTAACATACATTGATCTTTCTGATAACAACTTCTCAAGTGGTGTTGAGGCAATTGGTGTGGGAGAGCAGGTAAACATTCAGTACCTGAACTTGTCTCAAAACCTTCTGAATGGTACATTGCCAAGTTCCATTGGGAAATTGAACTCCATTCACAGTTTGGATTTGAGCTTCAATGAATTAGCCTCTAACTTGCCAGAGGTGCTGGCAAAGTTGACCTTGTTGGAGAGACTTAAGCTTCAAGGCAACCACTTCAGTGGTAAAATACCAAGTGGATTTCTCAAGTTGAGAAAGCTAAAGGAATTGGACTTATCAGATAATGTACTTGAAGGGGAAATTCCAGAGGGTAAGCCTCTAATTGACTTTCCTGGAAGTACTTATTCTGGAAATAAAGGTTTGTGTGGGAAGCCTCTTAGTCCCTGTAAAGAGTGA 1911 0.4239 MNYQLLQIVAVLLTVIAFGGALRQATGACSSDDLEGLLGFKNGIQMDTSGRLAKWVGGSCCEWEGVVCDNATTPRVTQINLPGLIEKDLFQTQMIGQLSHSITLLTSLEILDLGGLVGLSGTIPQTIGLQMLNLQKLNLFGNNLTGPVPESIGDLPNLQELELHENRISGSIPSSLGSLKNLKRLLLYSNQISGTIPFSFGNLTSLVELDVHDNAIMGHIPDSIGQMQALKNLDLSSNMLSGSIPSSLTNLTAISTLYMDTNYLEGTITFPSRSGEMPSLRFLRLHNNHLSGNIPPTFGYLVSLQRVSLSNNKLEGALPSSLGNLHSLTELYLNGNSFSGQIPKSIGQLSQLIMLNISKNLIEWPLPQEMSSLQNLQTLDLSFNPLNLSSIPPWLTNRLSSLSRIYLAGCGIKGQIPDLLQTIQEVDLSGNLLSGSIPSWIGSLSQLYLLNLSMNSLDSHIPDSLTNLHDLGVLDLHSNNLTGSITGVFDTGGSLTYIDLSDNNFSSGVEAIGVGEQVNIQYLNLSQNLLNGTLPSSIGKLNSIHSLDLSFNELASNLPEVLAKLTLLERLKLQGNHFSGKIPSGFLKLRKLKELDLSDNVLEGEIPEGKPLIDFPGSTYSGNKGLCGKPLSPCKE 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0277 636 Gene3D Ribonuclease Inhibitor 270 367 IPR032675 -
Aed11g0277 636 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 4 635 - -
Aed11g0277 636 SMART LRR_typ_2 155 179 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 373 398 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 565 588 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 277 300 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 541 564 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 131 154 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 444 467 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 589 611 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 468 491 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 203 227 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 325 349 IPR003591 -
Aed11g0277 636 SMART LRR_typ_2 301 324 IPR003591 -
Aed11g0277 636 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Aed11g0277 636 PRINTS Leucine-rich repeat signature 230 243 - -
Aed11g0277 636 PRINTS Leucine-rich repeat signature 373 386 - -
Aed11g0277 636 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Aed11g0277 636 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515
Aed11g0277 636 Gene3D Ribonuclease Inhibitor 26 83 IPR032675 -
Aed11g0277 636 Gene3D Ribonuclease Inhibitor 84 269 IPR032675 -
Aed11g0277 636 SMART LRR_sd22_2 373 390 - -
Aed11g0277 636 SMART LRR_sd22_2 179 211 - -
Aed11g0277 636 SMART LRR_sd22_2 541 560 - -
Aed11g0277 636 SMART LRR_sd22_2 325 351 - -
Aed11g0277 636 SMART LRR_sd22_2 227 253 - -
Aed11g0277 636 SMART LRR_sd22_2 589 612 - -
Aed11g0277 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 635 - -
Aed11g0277 636 Pfam Leucine Rich Repeat 375 393 IPR001611 GO:0005515
Aed11g0277 636 SUPERFAMILY L domain-like 28 268 - -
Aed11g0277 636 Gene3D Ribonuclease Inhibitor 368 636 IPR032675 -
Aed11g0277 636 SUPERFAMILY RNI-like 274 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0277 Aed-Chr11 2321706 2323616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0277 6 634 Receptor kinase-like Gene Family AT4G08850 31.936 1.37e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0277 - - gmx:100799647 1096.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0277 11 2321706 2323616 Aed11g0277 11 2321706 2323616 ECH
Aed11g0277 11 2321706 2323616 Aed7g1719 7 20610168 20612102 PCT