Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1267 ATGATTCTCGGACTTGAACGCCACTCCGATGTTCTTTTTTCTTCGGAGAAACTCTCGGCCATCACGATGAGTCGATACTCTTATTATCCAATGCATGACTCTGACTCATCATCAGCTGTGCCAATGAGAAACAGCAGCTTCAAGAGGAGCATGTTGAGGAGTCGTTCTCTGAAGCTTTTCAGATCAAATTCCACCTACCCATCACGTAAAATTTGTTGCATTAACTCCCAGGATGATGATCATGATCATCACGATCCGGTTTCGTGGGAATCAATGGAGGGTCTTGTTCGTTGCCCTGCAAATTTTGTTCCTTTGTCTCCCATCAGCTTCATTGAGAGAGCAACGAAGGTTTGCGGAGACAGAACCTCGCTCGTGTATGGTTCTTTGGAGTATAACTGGAGTGAGACCTATCAACGGTGCTTGAAATTTGCGTCTTCTCTGACCCAGTTGGGAATTTCACGCGGGGATGTGGTTGCCACCCTATTGCCTAATGTCCCTGCAATGTATGAGTTACATTTTGCTGTCCCCATGGCCGGAGCCATTCTTTGTAACCTTAACTCACGTCTAGATGCAACTATGGTTTCAGTCCTTTTGGAGCATTCACAAGCCAAAAGAATTGCCAATTTAGTTCTAATTACCGACTCTGATTGCCCATCTACCATTGACACTACATCAAATAGTTATGAGTATGAAAGACTACTGGCTAATGGGCATAATGGTTTTGATATAGTGAGACCCAATAGTGAATGGGATCCTATAAGTATAAATTACACCTCTGGCACCACATCTAGGCCTAAAGGAGTTGTCTTCAGTCACAGGGGTGTTTATCTTAGCTCTCTAGCAACTGTTATACTCTTTGGAATGGATCTTTTTCCTGTTTATCTTTGGAATGTTCCAATGTTCCACTGCAATGGGTGGTGCCTCCCATGGGGAGTGGCATCACAACTTGGGACTAATGTTTGTATTAGGAAGGTCTCTCCAAAGAACATTTTTGACAATATAGCTCAGCATAAGGTGACATACATGGGAGGAGCGCCGACAGTGCTAAACATGATTGTGAACTCTGCATTGACCGATCGAAAGCCACTTAATCAAAAGGTGGAGGTGATGACAGGAGGTTCACCTCTGCCACCACAGATCCTTGCCAAGATGGAGGAGATTGGCTTTAGCATCACTCACATGTATGGCCTCACAGAAACATATGGTCCAAGCACTTTTTGTGCTTGGTGA 1230 0.4439 MILGLERHSDVLFSSEKLSAITMSRYSYYPMHDSDSSSAVPMRNSSFKRSMLRSRSLKLFRSNSTYPSRKICCINSQDDDHDHHDPVSWESMEGLVRCPANFVPLSPISFIERATKVCGDRTSLVYGSLEYNWSETYQRCLKFASSLTQLGISRGDVVATLLPNVPAMYELHFAVPMAGAILCNLNSRLDATMVSVLLEHSQAKRIANLVLITDSDCPSTIDTTSNSYEYERLLANGHNGFDIVRPNSEWDPISINYTSGTTSRPKGVVFSHRGVYLSSLATVILFGMDLFPVYLWNVPMFHCNGWCLPWGVASQLGTNVCIRKVSPKNIFDNIAQHKVTYMGGAPTVLNMIVNSALTDRKPLNQKVEVMTGGSPLPPQILAKMEEIGFSITHMYGLTETYGPSTFCAW 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1267 409 PANTHER ACYL-ACTIVATING ENZYME 207 409 - -
Aed7g1267 409 Pfam AMP-binding enzyme 113 405 IPR000873 -
Aed7g1267 409 Gene3D - 97 409 IPR042099 -
Aed7g1267 409 SUPERFAMILY Acetyl-CoA synthetase-like 78 407 - -
Aed7g1267 409 ProSitePatterns Putative AMP-binding domain signature. 255 266 IPR020845 -
Aed7g1267 409 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 207 409 - -
Aed7g1267 409 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 76 205 - -
Aed7g1267 409 PANTHER ACYL-ACTIVATING ENZYME 76 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1267 Aed-Chr7 10297873 10299970 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g1267 88 409 Miscellaneous Gene Families AT3G16910 42.776 1.29e-97 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1267 - - gmx:100500429 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1267 7 10297873 10299970 Aed7g1267 7 10297873 10299970 ECH
Aed11g1146 11 16952948 16955837 Aed7g1267 7 10297873 10299970 PCT