Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1146 ATGGCATCAGTACATTATGTTGCAGCTTTGGCACCAAATATTCCAGCACTATACGAGCTTCATTTTGGTGTTCCTATGGCAGGGGGTGTTCTTTCTGCGCTCAATACTCAATTGGATGTAACAACATTGTCTCTAATATTGGAACAATTAGAGCCATGCAAAATCATGTTCGTGGATTACCACTTAATCGATTCTGCTCTCAAAGCATGTGAATTTCTCTCCCTGAGAAAATGCAAGCCACCCCTCATTGTTCTAATGCCACATTATGACCAAGACCAATCTTTCTTAGTGAAGAATATCCCACCAGGTACCTTAAACTACAATGATTTAATTGAATATGGGAAAAAAGATTTTGAGGCTTTAAAACCTAGCATTGAACACAATCCTCCTATATCAGTGAACTACACATCAGGCTCCACTGGGATTCTTCCAAAAGGGGCTGTTTATAGTCACAGAAGTGCTTATCTTAATTCACTTGCATCAATTTCCCGTTTTGAGATGAAACAAATGCAAGCAGTGTTCCTATGGACAGTTGACATGTTTCGTTGCAATGGATGGTGCTTCACTTGGGGAATGCCTGCTATTGGTGGCACCAATATTTGCTTAAAGAATGTCTCAGCAAAAGGAATATATGATGCAATTCATCTTTACAGGGTGACTCATTTTTGCGGTGCACCTACCCTTTTGGACATGATTGCAAATTCATCACTTAGTGACCAGAGGCCTCTGCCTCATAGGGTGAGTGTCATAGTTGCTGGTGTGTTACCACCGATTCATGTTCTCAACAAGGTGTCACAACTTGGATTTGATGTGAAGATTGGATATGGCATGACTGAGACTTTAGGCCCTGTGATTGTAAGACCGTGGAACCCCAATTCAGATGGTGAACACACAAAGCTGAATTACAGTGTTTCGGAGTTTATGCAAGATGTTGTTGATGTGAAGGATCAAGAGACTGGTGAAAGCACTCCTCATGATGGGAAAACCATAGGTGAAATTATGTTCAAAGGTGATGCTTTGATGCTGGGGTACCTTAAGAATCCACAAGCAACGGAAAAGGCTTTTTGGGGTGGTTGGTATAGAACTGGGGACTTAGGTGTTAGAGAACCAAATGGTTCTATAACAATGAAGGATAGAGCAAAAGATATTATATATTCTGAGGGAGGAGAAGCTGTGAGCTCACTAGAGGTGGAAGCAGTGTTGTTGAATCATCCAATGGTTTTGAAAGCAGCTGTTGTGGGGAAATTTGATGAATGCTTGGTGGAATCACCATGTGCAGTTGTGAAATTGAAAGATGGATGTAGTGCCACTGTTGAAAATATCATCAAGTTCTGTGAAGATCATTTGGCTACTCACATGGTTCCTAGGACTGTGGTGTTTGGAGATTTGCCTGTTAATTCAACTGGGAAGGTTCAGAAATTTCTCATCAGGGAGAAGATCAAAAGCAGTGAGTGGTGTGACTCAATGAATTAG 1473 0.4121 MASVHYVAALAPNIPALYELHFGVPMAGGVLSALNTQLDVTTLSLILEQLEPCKIMFVDYHLIDSALKACEFLSLRKCKPPLIVLMPHYDQDQSFLVKNIPPGTLNYNDLIEYGKKDFEALKPSIEHNPPISVNYTSGSTGILPKGAVYSHRSAYLNSLASISRFEMKQMQAVFLWTVDMFRCNGWCFTWGMPAIGGTNICLKNVSAKGIYDAIHLYRVTHFCGAPTLLDMIANSSLSDQRPLPHRVSVIVAGVLPPIHVLNKVSQLGFDVKIGYGMTETLGPVIVRPWNPNSDGEHTKLNYSVSEFMQDVVDVKDQETGESTPHDGKTIGEIMFKGDALMLGYLKNPQATEKAFWGGWYRTGDLGVREPNGSITMKDRAKDIIYSEGGEAVSSLEVEAVLLNHPMVLKAAVVGKFDECLVESPCAVVKLKDGCSATVENIIKFCEDHLATHMVPRTVVFGDLPVNSTGKVQKFLIREKIKSSEWCDSMN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1146 490 Gene3D - 381 484 IPR045851 -
Aed11g1146 490 PANTHER ACYL-ACTIVATING ENZYME 4 482 - -
Aed11g1146 490 SUPERFAMILY Acetyl-CoA synthetase-like 6 481 - -
Aed11g1146 490 Pfam AMP-binding enzyme C-terminal domain 396 470 IPR025110 -
Aed11g1146 490 Pfam AMP-binding enzyme 7 384 IPR000873 -
Aed11g1146 490 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 4 482 - -
Aed11g1146 490 Gene3D - 3 380 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1146 Aed-Chr11 16952948 16955837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1146 17 482 Miscellaneous Gene Families AT1G20560 48.729 2.65e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1146 - - gmx:100819291 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1146 11 16952948 16955837 Aed11g1146 11 16952948 16955837 ECH
Aed11g1146 11 16952948 16955837 Aed7g1267 7 10297873 10299970 PCT